Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04463 ATGGCGTTTGATCAAAATTCTGTTCCAAAGGATCTGCGCGTATTGAATGTGGCACCAATAATGGTGGAGGAGACTCTCATTTCACCGGCAAGCGTCACCTCGCCTCCGACTCCTGATTCAGCTTCTGATTATTTCTATCCTGCTTCGGCCTCCGCGTCAGCGACCTGGTGCGTCCGCCCTATTGTGAGTCCTCCTTCTATTGGATTAAACTATGGTTCCGGTTTTGGTAACCGTGTTGTGGCTGGAAATGCATTGAATTTGGGAAATTGGGTAGGGACTAGTACTAGTAGTAATAATAATAATAATAATAGCAATAATGCTTTGCATTGTAATGATGGTGTTAATGTGAATGTAAGTGGTTTTTCTTATGGTGGTCATGGTGGAAATAGAGCGGTTGATGATGCCGGGGATGATTCGAATTCGGGTAGGAAAGTTAAATTTTTGTGTAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGTGTGTTGAGATATGTTGGAGGGCAGACAAGGATAATTAGTGTTAGGAGAGATGTGAGTTTTAATGATTTGGTCCAAAAAATGGTAGATACTTATGGACAACCTGTGGTTATTAAATATCAGTTACCGGAGGAGGATCTTGATGCGTTGGTTTCCATTGCTTGTCCTGATGATGTTGAGAATATGATGGAGGAGTATGGAAAATTGGTTGAGAGATCTCCTGATGGTTCTGCTAAATTGAGGGTTTTTTTGTTTCCTATGTCAGAGGTTGATATTTCTAGTGCAGCGCAGGTTGGAGATTTGCAGGATACCGGGCAGAAATATTTTGATGCTGTGAATGGTATCGTAGATGTGAATGGGGTTTCTGTTGGGTTCAAGAGGAAAGAGAGTGTTACAAGTGCAGCTTCAACACAAAATTCTGATTTGAGTGGGATAGAGACTATTGATAGCTCTCTTGCCGGTCAAGGGGATTCATCGCCCTGCATGTTATCGCCTAGAGAGTATGTAGCTACTTCTCCAGACACAAGTGCACATTTTCTGGTTTCTGAGTCCAGTACACCGGTATACTCAGGTGCTTCTCCTGTTTCATTTGGCACGCCTGTGACAAAGACCGGTCTAACATACCCTTCCTATATGCAGAATGAGATTGAGTTAGAAAAGCCTGTTCCTGTTACTTTGTCCCAGCAACCATTTGAATTGCATCAATCAAGAATGGAAATTCCACCTTCACCTTATTTGAATCACGGAGAGTATGTTCATCTGCCTCCCCAGACAGGGTTCCCAAATCCTCACCTTTTCGGAAAGATGGGGCCTGTTTTCGCCCAACAACAGTTTCATAGTAATGCTTCTGGATTAGCTTACCATCAGGCTATCCCCGGAGCACAAATGACAATGACTCAACCTTCTTCTCGTCTTGGTATAAGACCAAATCTCATCCAGCCACAACCATTGATACAAACACAACATAATCATCTGAACCAATATAGTGATGAAAATACATCAGGAATAAGGATTGTCCAGCTTCCTTCCGAACACAGCTACAATACATATCAGGTTCCAGTAAATCAAGTTCCCGTGAATCAAGTTCCATCTGTCATAGTTGGGGGTAATTGTGGTTGGGTTCAGGTTCCTCCACAACAACACGAGCATGGGTTATCACCTCAACAACAAGTAATTAACTCAGAGCAAATCCTTAGAGCCGAGGGATGTTCTATGTGTCAGAAAAAGCTGCCTCACGCCCATTCAGATCCAGTGGTTCAGGATCAACATGATGGCAGTTCAAGTCCAGTTCCTGATTCACGCCCAAGTTACAATAGTTTTCCGTTGGAGGACACTGTAAAAGCTCAAGCAACAAAGAGGGTTGAGCCTATGGTGGCATCGCCCTTAAAGGAAGGCATTGTTGAACAAGGGTATAGCACAAGGCCAAGTGTCATTAGCAAATTGAAAGCTCATAATGGAGCAAGACCTTGTACTGATAATACTGTGATTACTCATAATTTTGAGCCTCAGAATGAAGGTGGGATGATTTTTATACAAAATCCAAAAGAATTTGACCATCCCATGAATTCTTGTATCCAAGAAACAATTGGCAGGATAGGTGAAAAACGTTCTTCTGGAGATGGACTTGGGGCCACAGGAACACCACCATCATCTTATCCAGATGATGTTGTCCGCCAGCATACGACGCCGGTTGAAATCTGGGTTAAACAAGATGATCCTGTGAATAAACATGTCAATAATGATATACCTAGAGTTGATGGAACGCCTATACATACTTCAGAGTGCTCCTCTCAAGGATCTGCCAAAGAATACACTAATGAGCTTGCTGGTGTCATTTCAAAATCAGATGCAGTAGATAATTGGATTAGACAGGGATATCTAAGACCTGTTGATGGAAGGAATGACACACTCAAGATTAACATGGCAGAAGGTTATGTAGGTGATGATCAATGCTTGCTTCCAGTTGATAAATCATTAGATTACAACAGCCAGATTGCTGCAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCACATCAAAATTGATAGTTGACGCAAATAAAATTAAGATGATAGCATTGCAGCCATGTTCTTCTAAGGAAATTTCATTCAGGCACAATTCCAGGATAGGGGAATACAATGATGCTGTACAATCACCTGTGTTGGACGTTACTCAATCAAAGATTTTAAACCATCACAAGGATGATTCAACATCATCTACATCATCACCATCTTTCTTGTTTGGGGATATGCAGGATTCTCCAAACTCAGTTTTCGGCAATCAGGATCCTTGGAATATACACCATGGTACCTTCTTTCAACCTTCTGTTCTGAGCAAAGTTACATCGGAGAAAGAAACCTATTTTCATAAGGATTACTTTGGTGAAAATCCAGGAACCTACAAGAAATCAAATTTGGATGCACAATTTGATGGTGATCTCTACGAGTCATTCAAACATAATGGTTGGTGTGACAAAGGTTCAACCGAAGATCAACAACTTAAAGTTGTTGCTGAAGACGTAGCAGCTTCTGTTCTGCACCCATGTGCTCCTTCAAATCCTAACTTGCAATCTGAAGACATTTCCTGTCACAAAAACATTGAGGATGGTAATGTTCAAAATAATCTAATACATGCGAAGTGTAGAGATATAACTCAGGATGTCAAGAGTAACCTACCAGAGAAGGGAAATTTTGGCTTTCCGACATCGGGTGTTGGACGTTTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAATTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGAACTGATGTTGCAATTAAGCGAATAACTGATAGATGTTTTGCTGGAAAGCCTTCGGAACAAGAGCGCATGAGAGACGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCTAATGTGGTTGCTTTCTATGGTGTTGTGCTTGATGGCCCCGGAGATTCTGTGGCAACAGTAACCGAGTACATGACTAATGGTTCTCTCAGAAATGCCTTGCAAAAGAATGAGAGGAATCTAGACAAGCGCAGACGTCTTATGATTGCAATGGATGTGGCCTTTGGAATGGAATACCTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGCGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACACTGATCTCCGGAGGTGTGAGAGGAACTCTACCGTGGATGGCTCCAGAGCTACTGAATGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTCGGTATTGTGATGTGGGAACTCTTAACTGGCAATGAGCCATACGCTGATTTGCACTATGGTGCTATCATAGGTGGTATTGTGAGCAACACTTTGCGCCCTTCAATTCCCGAATCATGTGATCCGGAATGGTGTTTGTTGATGGAGAGATGTTGGGCCTCAGAACCATCAGAGAGACCCAACTTCACTGACATTGCTGATGAATTGCGTTCTATGGCAACCAAACGTCAAAATCAACAGCTACAACCCTCTCATTTGCACACACAAGTCAACAAATGA 4092 0.4238 MAFDQNSVPKDLRVLNVAPIMVEETLISPASVTSPPTPDSASDYFYPASASASATWCVRPIVSPPSIGLNYGSGFGNRVVAGNALNLGNWVGTSTSSNNNNNNSNNALHCNDGVNVNVSGFSYGGHGGNRAVDDAGDDSNSGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISVRRDVSFNDLVQKMVDTYGQPVVIKYQLPEEDLDALVSIACPDDVENMMEEYGKLVERSPDGSAKLRVFLFPMSEVDISSAAQVGDLQDTGQKYFDAVNGIVDVNGVSVGFKRKESVTSAASTQNSDLSGIETIDSSLAGQGDSSPCMLSPREYVATSPDTSAHFLVSESSTPVYSGASPVSFGTPVTKTGLTYPSYMQNEIELEKPVPVTLSQQPFELHQSRMEIPPSPYLNHGEYVHLPPQTGFPNPHLFGKMGPVFAQQQFHSNASGLAYHQAIPGAQMTMTQPSSRLGIRPNLIQPQPLIQTQHNHLNQYSDENTSGIRIVQLPSEHSYNTYQVPVNQVPVNQVPSVIVGGNCGWVQVPPQQHEHGLSPQQQVINSEQILRAEGCSMCQKKLPHAHSDPVVQDQHDGSSSPVPDSRPSYNSFPLEDTVKAQATKRVEPMVASPLKEGIVEQGYSTRPSVISKLKAHNGARPCTDNTVITHNFEPQNEGGMIFIQNPKEFDHPMNSCIQETIGRIGEKRSSGDGLGATGTPPSSYPDDVVRQHTTPVEIWVKQDDPVNKHVNNDIPRVDGTPIHTSECSSQGSAKEYTNELAGVISKSDAVDNWIRQGYLRPVDGRNDTLKINMAEGYVGDDQCLLPVDKSLDYNSQIAAEEEVILDNNFGTSKLIVDANKIKMIALQPCSSKEISFRHNSRIGEYNDAVQSPVLDVTQSKILNHHKDDSTSSTSSPSFLFGDMQDSPNSVFGNQDPWNIHHGTFFQPSVLSKVTSEKETYFHKDYFGENPGTYKKSNLDAQFDGDLYESFKHNGWCDKGSTEDQQLKVVAEDVAASVLHPCAPSNPNLQSEDISCHKNIEDGNVQNNLIHAKCRDITQDVKSNLPEKGNFGFPTSGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEYMTNGSLRNALQKNERNLDKRRRLMIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGNEPYADLHYGAIIGGIVSNTLRPSIPESCDPEWCLLMERCWASEPSERPNFTDIADELRSMATKRQNQQLQPSHLHTQVNK 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04463 1363 Gene3D Phosphorylase Kinase; domain 1 1071 1164 - -
Trre16g04463 1363 ProSiteProfiles Protein kinase domain profile. 1077 1344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g04463 1363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1202 1214 IPR008271 GO:0004672|GO:0006468
Trre16g04463 1363 SMART serkin_6 1077 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g04463 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 164 248 - -
Trre16g04463 1363 SUPERFAMILY CAD & PB1 domains 160 253 - -
Trre16g04463 1363 Pfam Protein tyrosine and serine/threonine kinase 1080 1340 IPR001245 GO:0004672|GO:0006468
Trre16g04463 1363 Pfam PB1 domain 164 247 IPR000270 GO:0005515
Trre16g04463 1363 Gene3D - 165 247 - -
Trre16g04463 1363 MobiDBLite consensus disorder prediction 581 600 - -
Trre16g04463 1363 ProSitePatterns Protein kinases ATP-binding region signature. 1083 1114 IPR017441 GO:0005524
Trre16g04463 1363 CDD PB1_UP2 148 246 - -
Trre16g04463 1363 CDD STKc_MAP3K-like 1083 1340 - -
Trre16g04463 1363 SMART PB1_new 159 248 IPR000270 GO:0005515
Trre16g04463 1363 MobiDBLite consensus disorder prediction 740 759 - -
Trre16g04463 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1070 1164 - -
Trre16g04463 1363 Gene3D Transferase(Phosphotransferase) domain 1 1165 1363 - -
Trre16g04463 1363 PANTHER SERINE-THREONINE PROTEIN KINASE 211 1342 - -
Trre16g04463 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1165 1356 - -
Trre16g04463 1363 PRINTS Tyrosine kinase catalytic domain signature 1196 1214 IPR001245 GO:0004672|GO:0006468
Trre16g04463 1363 PRINTS Tyrosine kinase catalytic domain signature 1159 1172 IPR001245 GO:0004672|GO:0006468
Trre16g04463 1363 PRINTS Tyrosine kinase catalytic domain signature 1267 1289 IPR001245 GO:0004672|GO:0006468
Trre16g04463 1363 PRINTS Tyrosine kinase catalytic domain signature 1311 1333 IPR001245 GO:0004672|GO:0006468
Trre16g04463 1363 MobiDBLite consensus disorder prediction 574 600 - -
Trre16g04463 1363 MobiDBLite consensus disorder prediction 695 716 - -
Trre16g04463 1363 SUPERFAMILY Protein kinase-like (PK-like) 1070 1338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04463 Trre-Chr16 49400439 49408410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04463 68 614 MAP Kinase Kinase Kinase AT3G46920 36.568 2.46e-77 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trre16g04463 PK_Tyr_Ser-Thr 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04463 - - mtr:11439273 2193.7