Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04444 ATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTATCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTACCGTCTCATCGCTATCACCGACTTCTTCAAGTTCGCCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAGAAACTTATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATCGCCAATTCAAAGGATCAGGAAACTATTGCACATCATGTGATAGAAGCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAGGTGGATTTTGTGCTCAAACACTACAAGGACCTTTCACCCTTCTTAAGGATATGCAACACCCTACAATTAAGTCCTGACTATCTCATTCCACAAGAAATGGGGGATGAATTAGAGATGACAAGATCAACAATAGTGGATTGTGATGAACAAATGAGTTCATATTCAGGATCATCATCAGGATCAGAGAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCCAATAATAATATCAATAAAGTTTCTGATGAAGACATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 750 0.372 MGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPFLRICNTLQLSPDYLIPQEMGDELEMTRSTIVDCDEQMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMANNNINKVSDEDMATILISRRKGIPHRSPLC 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04444 249 Pfam PLATZ transcription factor 60 131 IPR006734 -
Trre16g04444 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04444 Trre-Chr16 49238975 49240895 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre16g04444 PLATZ 8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04444 - - gmx:100785737 456.447