LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre16g04443	ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTATCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTACCGTCTCATCGCTATCACCGACTTCTTCAAGTTCGCCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAGAAACTTATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATCGCCAATTCAAAGGATCAGGAAACTATTGCACATCATGTGATAGAAGCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAGGTGGATTTTGTGCTCAAACACTACAAGGACCTTTCACCCTTCTTAAGGATATGCAACACCCTACAATTAAGTCCTGACTATCTCATTCCACAAGAAATGGGGGATGAATTAGAGATGACAAGATCAACAATAGTGGATTGTGATGAACAAATGAGTTCATATTCAGGATCATCATCAGGATCAGAGAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCCAATAATAATATCAATAAAGTTTCTGATGAAGACATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG	756	0.3717	MIMGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPFLRICNTLQLSPDYLIPQEMGDELEMTRSTIVDCDEQMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMANNNINKVSDEDMATILISRRKGIPHRSPLC	251

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre16g04443	251	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	6	250	-	-
	Trre16g04443	251	Pfam	PLATZ transcription factor	62	133	IPR006734	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre16g04443	Trre-Chr16	49238975	49240901	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Trre16g04443		PLATZ	8.1e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre16g04443	-		-	gmx:100785737	459.914