Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04436 ATGTTGAAAGTGAAGGGAGGAACAAGACCACCATGGGTAGGACTTGGAGCTGCAGTATGGGTACAAATAGCAGTTGGAAATGCTTACACATTCCCACTTTATTCACCTTCTTTCAAATCTGTTCTTGGTTTCAATCAAAGTCAAGTTACTCTTCTTGGTGTTGCTAATGATATTGGTGAAAATGTTGGTCTTCTTCCTGGTATTGTTTGTAACAAGTTCCCTCCTTGGCTTATGCTTTTCATTGGTGCTCTTTTCTCTTTCCTTGGTTTTGGTCTTCTTTGGCTCTCTGTCTCTCAAACACTTCCTCCCCTTCCTTATCCTTTGCTATGGTTTGCACTTGCTATTGCTACAAACAGTTGTGCATGGTTAACCACTGCTATTCTTGTGACAAACATGAGAAATTTCCCTGTCAGTAGAGGAACAGTTGCAGGAATATTGAAAGGTTATGGAGGGATAAGTGGTGCAGTTTTCACCGAAATCTACAGGGCACTTCTTCATAATTCATCTTCTAATTTCCTCTTGTTTCTTGCTGTTGGCATTCCTGTTTTGTGCTTCACTGTCATGTTTCTCATTCGTCCTTGTACACCGGTTTCTGGCGAGAATTCTTCAGAAAAATGGCATTTTCTTTTCATTCAATGTTCAAGTGTGGCTTTAGGTGTATATTTACTTGTAACAACCACACTTGATTACATTCTTCACATAAATTCCACTGTGTCTTATGCTTTGGTGACTTTGATGATTCTTCTTCTCATGGCTCCTCTTGCTATCCCTATAAAGATGACACTGTTTCCTCAAAAAGTCGATGAATCAGAAGTAAATGAACAAAGTGAAGGCAAAGAAATCACAAAACCCCTTTTAAAATCTTCATCGGCTACTGCACTTGGTAGTTTCTCCGATGCTGGTGGTTTATCTGAGGTTGATTTACTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCAAAAAAGAGAAGGCCTAGAAGAGGGGAAGATTTTACATTTACTGAGGCATTGGTTAAGGCTGATTTCTGGCTGTTATTTTTTGTATACTTTGTCGGTGTTGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTGCTGCTCAAGGTGTTGAAGATATCACTATCTTACTCTCAGTTTTCAGCTTTTTCAATTTTGTTGGCCGACTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGGACGAAAACGATTCCGCGGACAGTTTGGATGACATGCACACAAATAGTTATGATAATTGTGTACCTTCTGTTAGCACATGCCATCAAAGGAACACTTTATCCAGCAGTTGGATTTCTTGGCATCTGCTATGGAGTGCAATTTTCCATACTGATTCCAACAGTTTCCGAGCTTTTTGGTTTGAAGCACTTCGGATTATTTTTCAATTTCATGTCATTAGGTAATCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGCCGTATATATGACAACGAATTGGCAAAGCAACAAGGTTTTGGTCTCATTGCTTCAAGTATTTCATGTGTTGGTCCTGATTGTTTTAAGGTCACCTTTTTGGTACTTGCTGCTGTTTGTGTTGCCGGTACCATTTCGAGCATTATCTTGACTATAAGAATTAAGCCGGTTTATCAAATGCTTTATGCTGGTGGTTCTTTTAGGTTACCTCAAATGTCAGTCCAATAA 1692 0.3966 MLKVKGGTRPPWVGLGAAVWVQIAVGNAYTFPLYSPSFKSVLGFNQSQVTLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGALFSFLGFGLLWLSVSQTLPPLPYPLLWFALAIATNSCAWLTTAILVTNMRNFPVSRGTVAGILKGYGGISGAVFTEIYRALLHNSSSNFLLFLAVGIPVLCFTVMFLIRPCTPVSGENSSEKWHFLFIQCSSVALGVYLLVTTTLDYILHINSTVSYALVTLMILLLMAPLAIPIKMTLFPQKVDESEVNEQSEGKEITKPLLKSSSATALGSFSDAGGLSEVDLLLAEGEGAVVPSKKRRPRRGEDFTFTEALVKADFWLLFFVYFVGVGTGVTVINNLAQVGAAQGVEDITILLSVFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIVMIIVYLLLAHAIKGTLYPAVGFLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDNELAKQQGFGLIASSISCVGPDCFKVTFLVLAAVCVAGTISSIILTIRIKPVYQMLYAGGSFRLPQMSVQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04436 563 Pfam Nodulin-like 11 258 IPR010658 -
Trre16g04436 563 CDD MFS_Mch1p_like 10 532 - -
Trre16g04436 563 Gene3D MFS general substrate transporter like domains 1 195 IPR036259 -
Trre16g04436 563 SUPERFAMILY MFS general substrate transporter 249 544 IPR036259 -
Trre16g04436 563 Gene3D MFS general substrate transporter like domains 338 546 IPR036259 -
Trre16g04436 563 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 547 - -
Trre16g04436 563 SUPERFAMILY MFS general substrate transporter 13 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04436 Trre-Chr16 49160261 49163360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04436 2 559 Nodulin-like Gene Family AT1G80530 58.333 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04436 - - gmx:100787328 814.298