LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre16g04415	ATGGGAGCTGTAATTCTCCCAGATCTCGGTACTGAGATTTTGATTCCTGCTTGTGCTGTCATTGGAATCGTTTTTGCTCTTTTCCAATGGCTTATCGTTTCCAAAGTTAAGCTCACTGCTGGTATTGACTCTTCTTCTGAACCTGCCCCTAAAAATGGTTACAACGATTCACTTATCGAAGAAGAAGAAGGTATCAACGACCATAACGTTGTTCTTAAATGTGCTGAAATCCAGAACGCTATCTCCGAAGGATCAACCTCCTTCCTTTTCACCATGTACAAGTATGTTGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGCTCCGTGGAAGGATTCAGCACCAGCCACCAGCCTTGCACTTACGATGAAACTAAGATGTGCAAGCCAGCTCTTGCCACAGCCCTTTTCAGCACCATATCTTTTGTGCTTGGTGGCATTACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCTTGGAGGCAAGAAAGGGTGTTGGAAAGGCTTTCATTACCGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTTCATTACCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACCAAGGCTGCTGATGTAGGTGCCGATCTTGTTGGCAAGGTTGAAAGAAACATTCCCGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTCGGTGATAATGTTGGTGATATCGCCGGTATGGGATCCGATCTATTTGGCTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCTTCCATCTCATCTTTTGGAGTGAATCATGAGTTCACTCCCATGTTGTTCCCTCTCATCATCAGTTCTGTGGGTCTCCTTGTTTGTTTGCTCACCACCTTATTTGCCACCGACTTTTTTGAGATCAAACTTGTAAAGGAAATTGAGCCAGCATTGAAAAAACAGCTCGTTATTTCAACAGCACTGATGACAATTGGAATTGCAATTGTTAGTTGGATTGCACTCCCATCTACATTCACCATCTTCAATTTCGGAGAGCAGAAAGTTGTCAGGAACTGGCAACTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATCATTGGTTTTGTTACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCATTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAGTCAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTACGGTGTTGCTGTGGCTGCACTTGGAATGTTGAGTACCATCGCCACTGGTTTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAAATGGCTGGAATGAGTCACAGAATCCGTGAGAGAACCGATGCCCTTGATGCTGCAGGAAACACAACTGCCGCTATTGGAAAGGGTTTTGCTATTGGTTCTGCCGCTCTTGTGTCTCTTGCCCTCTTCGGTGCCTTCGTGAGCCGAGCTGGTATTACAACAGTTGATGTGCTAACTCCCAAGGTTTTCATTGGTTTGCTTGTGGGTTCTATGCTCCCATACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAGCCCTTAAGATGGTTGAGGAAGTGCGCAGACAATTCAACACCATTCCTGGGTTGATGGAAGGAACCGCCAAACCTGACTATGCAACATGTGTTACTATCTCCACCGACGCATCTATCAAAGAAATGATCCCACCTGGTGCCCTTGTTATGCTAACACCCCTTATTGTTGGGATCTTTTTCGGTGTTGAAACACTTTCTGGTGTCCTTGCTGGATCTTTGGTTTCTGGTGTACAGATTGCCATCTCTGCATCCAACACTGGCGGTGCTTGGGATAACGCCAAGAAGTACATTGAGGCTGGTGCCTCTGAGCATGCAAGAAGCCTTGGTCCAAAGGGGTCAGATCCACACAAGGCAGCAGTTATTGGTGACACCATTGGGGATCCATTGAAAGATACATCCGGACCATCACTTAACATCCTTATCAAGCTGATGGCCGTCGAGTCTCTCGTGTTTGCTCCTTTCTTCGCAACCCACGGTGGTCTTCTCTTCAAAATTTGGTCATAG	2304	0.454	MGAVILPDLGTEILIPACAVIGIVFALFQWLIVSKVKLTAGIDSSSEPAPKNGYNDSLIEEEEGINDHNVVLKCAEIQNAISEGSTSFLFTMYKYVGIFMVAFAILIFLFLGSVEGFSTSHQPCTYDETKMCKPALATALFSTISFVLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGVNHEFTPMLFPLIISSVGLLVCLLTTLFATDFFEIKLVKEIEPALKKQLVISTALMTIGIAIVSWIALPSTFTIFNFGEQKVVRNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLLVGSMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVTISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIWS	767

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre16g04415	767	Pfam	Inorganic H+ pyrophosphatase	21	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Trre16g04415	767	PIRSF	H+-PPtase	11	764	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Trre16g04415	767	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Trre16g04415	767	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Trre16g04415	767	NCBIfam	V-type H(+)-translocating pyrophosphatase	11	761	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre16g04415	Trre-Chr16	48996808	49000736	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre16g04415	5	629	Primary Pumps ATPases	AT1G15690	87.420	0.0	1116

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre16g04415	K23025		-	gmx:100775864	1408.66