Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04365 ATGGCAACACAACCTGATGATGAGCATCCAAAGAAGGCCTTAGGATGGGCAGCAAGAGATTTTTCTGGTCTTCTCTCCCCTTTCAATTTCTTTAGAAGAGATACAGGTGAAAAAGATGTGGCACTCAAAATATTGTATTGTGGGATATGTCACTCAGATGTCCACATGATGAAGAACGAATGGGGCATATCCACATATCCACTAGTTCCTGGGCATGAAATTGTTGGTATAGTGACAAAGGTAGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAAGTAGGTGTTGGCTACATGATTGACTCATGTCGATCATGTCAAAATTGTACCGAAAATCTTGAAAGTTATTGTCCCCGATTTATACCCACATGTGGTGCCAAGAAGTATCGTGATGGCACCACATATGGAGGTTACTCTGACTCACTAGTTGCAGACGAGCACTTTGTGGTTCATATTCCTGATGGTTTACCACTTGATGCCGCCGCTCCTCTTCTTTGCGCCGGCATCACAGTGTATAGTCCTCTTCGATATTTTGGACTCGATAAGCCTGGTCAACATATAGGCGTTGTTGGTCTTGGTGGACTTGGTCACATGGCTGTTAAGTTTGCCAAAGCTTTTGGTGCTAATGTGACTGTAATTAGTACATCACCTAACAAAGAAAAGGAAGCAATAGAACTCTTAGGAGCTGACTCATTTATTATAAGTCATGATAAAGATAATATGAAGGCTGCAATGGGCACTTTGGATGGTATCATTGATACAGTTTCAGCTGATCATTCTCTCTCACCTCTTATTGGTTTGTTAAAGTCTCATGGAAAACTTGTAATGGTTGGTGCTCCAATGAAGCCTCTTGAGATCCATGCCTCTCAATTACTTTTGGGGAGAAAGATGGTAGCTGGAAGTAATATTGGAGGTATGAAAGAGACTCAAGATATGATTAATTTTGCTGCTGAACATGATGTAAAACCTACCATTGAAGTCATTCCTATGGATTATGTTAACATTGCAATTGAGCGACTCCTCAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACTCTCAAACCAAGCTCTCAACTCTAA 1092 0.4066 MATQPDDEHPKKALGWAARDFSGLLSPFNFFRRDTGEKDVALKILYCGICHSDVHMMKNEWGISTYPLVPGHEIVGIVTKVGSKVEKFKVGDKVGVGYMIDSCRSCQNCTENLESYCPRFIPTCGAKKYRDGTTYGGYSDSLVADEHFVVHIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGQHIGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKEKEAIELLGADSFIISHDKDNMKAAMGTLDGIIDTVSADHSLSPLIGLLKSHGKLVMVGAPMKPLEIHASQLLLGRKMVAGSNIGGMKETQDMINFAAEHDVKPTIEVIPMDYVNIAIERLLKADVKYRFVIDIGNTLKPSSQL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04365 363 FunFam Uncharacterized protein 16 166 - -
Trre16g04365 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Trre16g04365 363 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Trre16g04365 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Trre16g04365 363 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Trre16g04365 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Trre16g04365 363 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0016616
Trre16g04365 363 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Trre16g04365 363 SUPERFAMILY GroES-like 9 199 IPR011032 -
Trre16g04365 363 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Trre16g04365 363 Gene3D - 167 323 - -
Trre16g04365 363 Gene3D - 16 353 - -
Trre16g04365 363 CDD CAD1 15 352 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04365 Trre-Chr16 48609338 48612205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04365 11 363 Monolignol Biosynthesis Gene Families AT4G37990 67.422 8.88e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04365 K23232 - tpra:123922700 661.373