Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04331 ATGGTTGTGTCTGAGTTTGCAGTGGGGATCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAGCCCTAGCCAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTAGATGCTTCATTTCTAATGTGAGACAATTTTCATCTAAAGAAGATGGTTTGGTTTCTCTTCAAAGCAATGTCATTAAAGGTCTTTCTCCTGAAAATGCTCAGAGTGTTATCGGTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAATTCGTGAAAATCGAGTTCTGCTAGTGTTAGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAGTTTCTTCCTGATGAACTGAAGTGGCTACAATGGCAAGGATGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCACGTGAACTGGCTGTCCTCGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGCGGGGATTGGAAAGTCACAAGGTACCAGAGAACCTAATGGTTATAAACCTCTCCGACTGCTACAGACTTGCTGCAATCCCTGATTTATCTCGGTGTCTCAGGCTAGAGAAAATTAATTTGGAGAGATGCATTAATCTAAAGAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTCAATTTGACGCATTGTGAAAAGCTTATTGAACTTCCTAGTGATGTCTCTGGACTGAAACATTTGGAGAGCCTTTTTCTTTCTAAGTGCTACAAGTTGAAAGCATTACCAGAAAACATAGGCATTCTTAAATCTCTGAAAACACTTTTTGCCGATGAAACTGCTATAGTAAAGTTGCCATAG 891 0.3973 MVVSEFAVGINKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTALAKALFNSLVGRFERRCFISNVRQFSSKEDGLVSLQSNVIKGLSPENAQSVIGDVNAGISVIKRIIRENRVLLVLDDVDNVNQLDALIGKFLPDELKWLQWQGCPLEGIPLDTLPRELAVLDLSNGQKIKSLRGLESHKVPENLMVINLSDCYRLAAIPDLSRCLRLEKINLERCINLKRIHESIGSLTTLRNFNLTHCEKLIELPSDVSGLKHLESLFLSKCYKLKALPENIGILKSLKTLFADETAIVKLP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04331 296 PRINTS Disease resistance protein signature 108 122 - -
Trre16g04331 296 PRINTS Disease resistance protein signature 30 45 - -
Trre16g04331 296 Gene3D Ribonuclease Inhibitor 159 296 IPR032675 -
Trre16g04331 296 SUPERFAMILY L domain-like 125 296 - -
Trre16g04331 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 136 IPR027417 -
Trre16g04331 296 Pfam NB-ARC domain 12 136 IPR002182 GO:0043531
Trre16g04331 296 Gene3D - 3 149 IPR027417 -
Trre16g04331 296 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 130 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04331 Trre-Chr16 48234032 48236264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04331 133 296 WRKY Transcription Factor Family AT4G12020 35.503 3.43e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04331 - - mtr:11408681 281.182