Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04330 ATGGTTGTGTCTGAGTTTGCAGTGGGGATCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAGCCCTAGCCAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTAGATGCTTCATTTCTAATGTGAGACAATTTTCATCTAAAGAAGATGGTTTGGTTTCTCTTCAAAGCAATGTCATTAAAGGTCTTTCTCCTGAAAATGCTCAGAGTGTTATCGGTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAATTCGTGAAAATCGAGTTCTGCTAGTGTTAGATGATGTTGATAATTGGCTACAATGGCAAGGATGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCACGTGAACTGGCTGTCCTCGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGCGGGGATTGGAAAGTCACAAGGTACCAGAGAACCTAATGGTTATAAACCTCTCCGACTGCTACAGACTTGCTGCAATCCCTGATTTATCTCGGTGTCTCAGGCTAGAGAAAATTAATTTGGAGAGATGCATTAATCTAAAGAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTCAATTTGACGCATTGTGAAAAGCTTATTGAACTTCCTAGTGATGTCTCTGGACTGAAACATTTGGAGAGCCTTTTTCTTTCTAAGTGCTACAAGTTGAAAGCATTACCAGAAAACATAGGCATTCTTAAATCTCTGAAAACACTTTTTGCCGATGAAACTGCTATAGTAAAGTTGCCATAG 840 0.3988 MVVSEFAVGINKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTALAKALFNSLVGRFERRCFISNVRQFSSKEDGLVSLQSNVIKGLSPENAQSVIGDVNAGISVIKRIIRENRVLLVLDDVDNWLQWQGCPLEGIPLDTLPRELAVLDLSNGQKIKSLRGLESHKVPENLMVINLSDCYRLAAIPDLSRCLRLEKINLERCINLKRIHESIGSLTTLRNFNLTHCEKLIELPSDVSGLKHLESLFLSKCYKLKALPENIGILKSLKTLFADETAIVKLP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04330 279 Gene3D - 3 137 IPR027417 -
Trre16g04330 279 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 123 IPR044974 GO:0006952
Trre16g04330 279 Pfam NB-ARC domain 12 127 IPR002182 GO:0043531
Trre16g04330 279 SUPERFAMILY L domain-like 124 279 - -
Trre16g04330 279 Gene3D Ribonuclease Inhibitor 138 279 IPR032675 -
Trre16g04330 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 206 IPR027417 -
Trre16g04330 279 PRINTS Disease resistance protein signature 30 45 - -
Trre16g04330 279 PRINTS Disease resistance protein signature 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04330 Trre-Chr16 48234032 48236264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04330 128 279 WRKY Transcription Factor Family AT5G45050 29.825 7.01e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04330 - - mtr:11408681 262.692