Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04288 ATGGCTTTGGCAGTTAAAGCCCAACTGAAAAGTGGGTTTTATTCAACTACATGTCCAACAGCTGAGTCCATCGTACGGTCCACAGTTGTATCTTACTTCAACAAAGATCCAACCATTGCTCCTGCCCTACTCAGGCTTCATTTCCATGATTGCTTTGTGCAAGGCTGCGATGGATCCATATTGATTGCAGGCTTCTCTGCAGAGAGGAATGCATTGACAAACCTTGGTCTAAGAGGTTTTGAAGTGATAGATAATGCAAAATCACAAATAGAAGCCATATGCCCTGGAGTAGTCTCATGTGCTGACATTCTAGCATTGGCAGCTCGTGATGCCGTCGATTTGAGTGATGGCCCTAGTTGGTCAGTATCCACAGGAAGAAGAGATGGAAGGATTTCATTATCATCTCAAGCCACAAACTTACCTTCTCCACTTGAACCTGTTTCTGTCCACAAACAAAAATTTGCTGCCAAAGGTCTAAATGATCATGACCTTGTTACCTTACTTGGTGCACATACCATAGGACAAACAGATTGCAGATTCTTTAGTTATCGTCTATACAATTTCACAACCACCGGCAATGCTGATCCTACTATAAACCAAGCTTTCTTATCCCAACTTCAAGTACTATGTCCAAAGAATGGCGATGGCTTGAGAAAGGTGGCTTTGGACAAAGATAGTCCAGCCAAATTTGATGTGAGTTTCTTCAAAAATGTACGCGATGGTAACGGGATTCTAGAGTCGGATCAAAGGCTGTGGGAAGATTCTGCTACAAGAAGGGTGGTACAAAATTATGGTGGAAATTTTAGAGGGCTATTGGGGTTTAGATTTGATTTTGAATTTCCAAAGGCTATGATTAAGTTGAGTAGTGTAGATGTGAAGACTGGTACTGATGGAGAGATTAGAAAAGTGTGCTCAAAATTTAATTGA 927 0.4142 MALAVKAQLKSGFYSTTCPTAESIVRSTVVSYFNKDPTIAPALLRLHFHDCFVQGCDGSILIAGFSAERNALTNLGLRGFEVIDNAKSQIEAICPGVVSCADILALAARDAVDLSDGPSWSVSTGRRDGRISLSSQATNLPSPLEPVSVHKQKFAAKGLNDHDLVTLLGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQAFLSQLQVLCPKNGDGLRKVALDKDSPAKFDVSFFKNVRDGNGILESDQRLWEDSATRRVVQNYGGNFRGLLGFRFDFEFPKAMIKLSSVDVKTGTDGEIRKVCSKFN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04288 308 SUPERFAMILY Heme-dependent peroxidases 8 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 ProSitePatterns Peroxidases active site signature. 40 51 IPR019794 GO:0004601
Trre16g04288 308 CDD secretory_peroxidase 8 307 IPR033905 GO:0004601|GO:0042744
Trre16g04288 308 Pfam Peroxidase 25 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 FunFam Peroxidase 141 287 - -
Trre16g04288 308 PRINTS Haem peroxidase superfamily signature 98 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Haem peroxidase superfamily signature 163 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Haem peroxidase superfamily signature 116 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Haem peroxidase superfamily signature 40 54 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 163 173 IPR019793 -
Trre16g04288 308 Gene3D - 12 308 - -
Trre16g04288 308 PANTHER PEROXIDASE 25-RELATED 11 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 FunFam Peroxidase 12 153 - -
Trre16g04288 308 Gene3D Peroxidase, domain 2 141 287 - -
Trre16g04288 308 PRINTS Plant peroxidase signature 97 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 162 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 78 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 116 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 42 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 PRINTS Plant peroxidase signature 18 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre16g04288 308 ProSiteProfiles Plant heme peroxidase family profile. 8 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04288 Trre-Chr16 47836299 47838034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04288 5 308 Peroxidase AT2G41480 73.770 2.24e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04288 K00430 - gmx:100816487 527.709