Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04232 ATGGAACTAGAATTCTTGTCTTGGCTTAAACTTGTTTCTTTCTCTTTCATTTTTCTTCTCTTTGTTCTCAAACTCACTGTCTTACTTTGGTGGAGACCAAGAAAAATTGAAGATTATTTCTCTAAACAAGGAATTAGAGGACCCCCTTATCGTTTCTTCATTGGAAATGTTAAAGAACTTGTTAGTATGATGTTGAAAGCTTCCTCTCAACCCATGCCTAATTTCTCTCATAACATTCTTCCTAGAGTCCTTTCTTTCTACCATCATTGGAAGAAAATTTATGGTGGAACATTCCTAGTTTGGTTTGGACCCACGGTTCGTCTTACAGTTTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTTTATGAGAAAAATGAAGCCCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTTAAAGGAGAAAAATGGGCTCACCACCGCAGAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCAGCAATGAGTGACAAAGGTGAGGTGGAAATCGAAGTTTCTGAGTGCTTTCAAACCCTAACCGAAGATGTTATTACTAAGACCGCGTTTGGAAGCAGCTATCAAGATGGAAAAGCTATTTTCCACTTACAAACTCAACAAATGGTCTTAGCTGCTGATGCCTTTCAAAAAGTTTTCATTCCCGGTTACAGATTCTTTCCCACAAAGAAGAATATAAAATCTTGGAAACTGGACAAACAAATAAAGAAATCATTGGTGAAGCTAATAGAAAGAAGAAAAGAGAATTCGAAAGAGAGATTATTATTAATTGATGAAAAAAGTCCAAAAGATTTACTAGGACTAATGATAGAAGCAGCATCAAACAACAACAATAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGTTTTTTCTTTGCAGGCAAACAAACCACATCAAACTTGCTGACGTGGACGACCATTCTATTAGCAATGCACCCACATTGGCAGGTAAAGGCACGTGATGAGGTTATCAAGATGTGTGGGTCACGTGACCTTCCCACTAAAGATTATGTTTTAAAGCTTAAGACGCTAAACATGATAGTTAACGAGTCTCTAAGACTGTACCCACCAACAATCGCAACAATCCGACGGGCAAAAACAGACGTGGAATTAGGAAGCTATAAAATACCACGCGGAACAGAGCTTTTAATTCCAATCCTAGCCGTTCATCATGATCAAGCTATATGGGGTAACGATGTAAACGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTAGCACGCGCCGCGAAACATCCAGTTGCATTCATACCTTTTGGCCTCGGTGTACGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAACTGGCCCTTGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTCCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCCACGTTGGATAATCCTCATCAAGGGTCCTCCTCATAG 1593 0.4055 MELEFLSWLKLVSFSFIFLLFVLKLTVLLWWRPRKIEDYFSKQGIRGPPYRFFIGNVKELVSMMLKASSQPMPNFSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMSDKGEVEIEVSECFQTLTEDVITKTAFGSSYQDGKAIFHLQTQQMVLAADAFQKVFIPGYRFFPTKKNIKSWKLDKQIKKSLVKLIERRKENSKERLLLIDEKSPKDLLGLMIEAASNNNNNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVKARDEVIKMCGSRDLPTKDYVLKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGSYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSTLDNPHQGSSS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04232 530 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Trre16g04232 530 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 Pfam Cytochrome P450 84 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 Gene3D Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04232 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 511 - -
Trre16g04232 530 FunFam Cytochrome P450 734A1 30 519 - -
Trre16g04232 530 CDD CYP734 84 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04232 Trre-Chr16 47361350 47366155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04232 1 523 Cytochrome P450 AT2G26710 75.332 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04232 K15639 - gmx:100780027 889.026