Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04192 ATGGTCTTTTTATGGTCTTTAGGAAGATTGGACACTGTATTGGAGCATGAGTTTCAAGGTGTCAAAAAGTTCACCATGCTTCAGAGTTGGCATGTACATACACCAAGGCCTGTTGAATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGATCAGGCTCTATCTAAGTATTCAAATTCTAATGCCGTTATTTACGTTGGTTGTGGAGAACGTGGAAATGAAATGGCAGAGGTTCTAATGGACTTTCCACAACTCACAATGACATTACCTGATGGCCGTGAAGAATCTGTCATGAAGCGTACAACACTTGTGGCTAACACTTCGAACATGCCAGTGGTTGCTCGTGAAGCTTCAATTTATACAGGAATCACTTTAGCCGAGTATTTTAGAGATATGGGTTACAATGTCAGTATGATGGCAGATTCAACATCTAAATGGGCAGAAGCATTGCGTGAAATCTCAGGGCAGCTGGTGGAAATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCATGTTTGGCCTATTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGGACAGGTAGTGTAACAATTGTTGCCGTTGTTTCTCCACCTGGAGGAGATTTCTCAGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGGATGCATTTCTTTATGTGGCTAACAATATTCAGCCTTCTAATAAAAGTGATATTGAAATGAGAATGCATATTCCAATATTCAGCCTTCTCATATTGTCTTTGTCTGGTTATCTCGGGATGAAAGTTTTTGCTTCTGAGGCCTGA 810 0.4185 MVFLWSLGRLDTVLEHEFQGVKKFTMLQSWHVHTPRPVESKLAADTPLLTDQALSKYSNSNAVIYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVVAREASIYTGITLAEYFRDMGYNVSMMADSTSKWAEALREISGQLVEMPADSGYPAYLAACLAYFYERAGKVKCLGGPERTGSVTIVAVVSPPGGDFSDPVTSATLSIVQDAFLYVANNIQPSNKSDIEMRMHIPIFSLLILSLSGYLGMKVFASEA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04192 269 Gene3D - 49 236 IPR027417 -
Trre16g04192 269 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 52 223 IPR000194 GO:0005524
Trre16g04192 269 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 51 222 IPR022878 GO:0046034|GO:0046961
Trre16g04192 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 222 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04192 Trre-Chr16 46790009 46792385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04192 11 222 Primary Pumps ATPases(2) AT1G78900 79.012 5.91e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04192 K02145 - gmx:100775727 368.237