Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04095 ATGGCTTTGTGGATCATTATCCTTGCTACAATTGCAGCAGCTATTCTAATATACCGACTTCTAAACCTCATAACAAAACCTTCCTTACCTCTTCCACCCGGGCCAAGCCCATGGCCCATCGTCGGAAACCTACCTCACATGGGACCAGTCCCGCACCATGCCCTAGCCGCATTAGCCCTCAAACACGGCCCTCTCATGCATCTTCGATTAGGTTTTGTCGATGTAATTGTTGCCGCCTCCGCCTCCGTGGCCGAACAATTCCTAAAAGTTCATGATGCTAATTTCTCTAGCCGGCCACCTAACGCCGGCGCAAAATATATTGCTTATAATTATCAAGATCTTGTTTTTGCTCCCTATGGAGCACGGTGGAGGTTGTTAAGGAAAATATCTTATGTTCACATGTTCTCTTCTAAGGCTTTGGATGACTTTAGACACATACGTCAGGATGAGGTAGCAAGATTGATCCGCAATTTATCAAGTTCTGGGAGCAAAGCAGCAAACTTAGGACAAATGTTAAATGTATGTACTACAAATGCATTAGCTAGGGTAATGATAGGACGGCGAGTATTTAATGAAGGGAATGGTGGAGGTGAATGTGACCCTAGGGCTGATGAATTTAAGTCAATGGTAGTTGAGCTTATGGTGTTAGCTGGAGTTTTCAATATTGGTGATTTTGTTCCTGCTTTGGAATGGTTAGATATTCAAGGTGTACAAGGAAAAATGAAGAAATTACATAAAAGATTTGATGCATTTTTAACTAGCATTATTGAAGATCACATGATTTCCAAGAGTGAGAAGCATAATGACTTGTTGAGTACGTTGTTATCACTAAAAGAAAAAGTTGATGAGGATGGTGACAAACTTAATGATACTGAGATCAAAGCATTACTCTTGAACATGTTCACAGCTGGAACAGACACATCATCAAGCACAATAGAGTGGGCTATTGCCGAACTAATAAAAAATCCAAAACTAATGATTCGTGTTCAAAATGAGTTGGACACTGTTGTGGGCCGAGACAAGCTTGTAACTGAACAAGACTTGGCCCATCTTCCTTACTTAGAGGCTGTAATAAAGGAGACGTTTCGTCTCCATCCATCAACCCCTCTTTCTCTCCCACGTGTTGCAACAAATAGTTGTGAAATCCTTAACTATCACATTCCCAAAGGTGCAACTCTCTTGGTCAATGTTTGGGCCATATCACGTGATCCCAAAGAATGGACTAATCCATTAGAGTTCAAGCCTGAAAGATTTCTCCCTGGTGGTGAGAAATTTGATGTTGATATTAAGGGAAATGACTTCGAGGTTATACCATTTGGTGCAGGACGTAGAATATGTGCTGGTATGAGTCTTGGTCTTAGGATGGTTCAACTTCTCACTGCAACATTGGCCCATGCATATGATTGGGAGTTGGAGAATGGGCTAAGTCCTGAAAAACTTAACATGGATGAAGCATATGGGCTTACTTTACAAAGGGCAGTTCCTATTGTGGCCCACCCTCGTCCAAGGCTTTCACCACATTTGTACTTGTAA 1533 0.4188 MALWIIILATIAAAILIYRLLNLITKPSLPLPPGPSPWPIVGNLPHMGPVPHHALAALALKHGPLMHLRLGFVDVIVAASASVAEQFLKVHDANFSSRPPNAGAKYIAYNYQDLVFAPYGARWRLLRKISYVHMFSSKALDDFRHIRQDEVARLIRNLSSSGSKAANLGQMLNVCTTNALARVMIGRRVFNEGNGGGECDPRADEFKSMVVELMVLAGVFNIGDFVPALEWLDIQGVQGKMKKLHKRFDAFLTSIIEDHMISKSEKHNDLLSTLLSLKEKVDEDGDKLNDTEIKALLLNMFTAGTDTSSSTIEWAIAELIKNPKLMIRVQNELDTVVGRDKLVTEQDLAHLPYLEAVIKETFRLHPSTPLSLPRVATNSCEILNYHIPKGATLLVNVWAISRDPKEWTNPLEFKPERFLPGGEKFDVDIKGNDFEVIPFGAGRRICAGMSLGLRMVQLLTATLAHAYDWELENGLSPEKLNMDEAYGLTLQRAVPIVAHPRPRLSPHLYL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04095 510 PANTHER CYTOCHROME P450 98A9 6 509 - -
Trre16g04095 510 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 SUPERFAMILY Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre16g04095 510 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 Gene3D Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g04095 510 FunFam Red aleurone1 24 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04095 Trre-Chr16 46003843 46009213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04095 31 509 Cytochrome P450 AT5G07990 69.231 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04095 K05280 - gmx:547475 787.334