Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04051 ATGGAGATTGAGGAACTTATTGATTTGGATAACAAAGAGAGTAATTGTGGTGGAAATAATAGCAAGAATGGTGATGGATTCATTGATAGGAGTAAAGTTAGGATTTTGCTTTGTGATAATGATTCCAAGAGTTCAGAAGAGGTTTTTACTCTTCTTTTGAATTGCTCTTATCAGGTTACAACTGTAAGATCAGCAAGGCAAGTTATTGATGCATTGAATGCGGAAGGGCAATATATAGACATCATACTGGCTGAAGTTGACCTTCCAACTAAAAAGGGCATGAAGATGTTGAAATACATAGCACGGGATAAAGAACTGCGCCGAATCCATATTATAAGTTTTTTATATCCATTCTGGCAGCTTGGACTTACAGAGAACAACATCTGTAGTTATGATTTTGATATGATAGCATCAGACCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCCGATGACACAGATGACAGGTCCAAAAGAAGCACTAATCCAGAGCCTGTAGTTTCAATCCAACAAGAACAAGAGGCCAGTAGTGCCACTGCTGCTGCTGTTATTGAGGAGCTTCCCTATGCTCGTGCATCAGAATATCAGCCTGATGTACCCGGAATTAGTGATCGGAGAACAGGTATGCTCATCTTTTTCCTTTGA 651 0.3963 MEIEELIDLDNKESNCGGNNSKNGDGFIDRSKVRILLCDNDSKSSEEVFTLLLNCSYQVTTVRSARQVIDALNAEGQYIDIILAEVDLPTKKGMKMLKYIARDKELRRIHIISFLYPFWQLGLTENNICSYDFDMIASDPSDANTNSTTLFSDDTDDRSKRSTNPEPVVSIQQEQEASSATAAAVIEELPYARASEYQPDVPGISDRRTGMLIFFL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04051 216 Gene3D - 27 116 - -
Trre16g04051 216 ProSiteProfiles Response regulatory domain profile. 34 154 IPR001789 GO:0000160
Trre16g04051 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 112 IPR045279 GO:0009736
Trre16g04051 216 SUPERFAMILY CheY-like 31 112 IPR011006 -
Trre16g04051 216 MobiDBLite consensus disorder prediction 144 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04051 Trre-Chr16 45703102 45705315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04051 22 182 Response Regulator Gene Family AT5G61380 58.081 7.19e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre16g04051 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04051 K12127 - gmx:100786522 294.664