Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04044 ATGAATCTGGTGATGAAGAGAATCATTGCAATGAGGAATCCAAGGGCCGACAATGAAGATGGAAACAACAAATTCTCAGATTTGGAAACTACCGTCACCGACAAATATGCAACTACTTCTTCCCCTCTGACTTTGATGCGTTTGATGGGTTTCTTCGTCATTTCTTTCATGCTCTTTTCCGTATTCTTCTCACTCTCTGTTGTTCTTCGAGACCCTCCCTCTGATGCTGCCATCTCATCTACAACTACTCTCTTCCAACAACACACACAATCACAACAACAAGGTTTTGATGGTGATGCATTTGATACTGTTGAGTTGCTAAAGGATAAACTGCTTGGCGGCCTTCTAGCTGATGGATTTGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGTTATGTTCCACAAAGGATTATCAGGAAAACCACCTTCTTACCTTATTTCTAAATTGAAAAAGTATGAAGCTCGACACAAACAATGTGGACCTTATACCGAATCCTATAACAAAACGGTGAAAGAACTCGGCTCTGGTCAATTTTCCGATTCCTCAGATTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTGGGAAATAGGATATTGACCCTAGCTTCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTTTACTAGTTGACCCTGGAGTGGATATGACTGATCTCTTTTGCGAACCATTTCCGGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTCAACAGTCAATTGAATAATTTCAACCAGGACTCGAATCAGTGTCATGGGAAAATGCTAAAAACTAATTCAATTACAAACTCCACCGTGCCATCTTTTGTTTATCTTCATCTAGCTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATGAAGAACAACATTTTCTCCAGAAAGTGCCTTGGTTAATCATGAAAACAGATAATTACTTTGTCCCGTCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTGAATGATCTCTTCCCAAAGAAGGACAAAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTGTGGGGACTTGTTGTGAGATACTATAATGCATATTTAGCTAAAGTTGATGAAAGAATAGGCATACAAATCAGAGTGTTCGACACCGAACCTGGTCCATTTCAACATGTATTGGATCAGATCTTAGCATGCACTTTGAAGGAGAATATTTTGCCTGATGTTAACCGCGGGGAAAATATTGATAGTTCATCAGGAACGCCAAAGTCAAAAGCTGTACTAATGACATCCTTAAACTCGGGTTATTTTGAAAATGTAAGAGACATCTATTGGGAATATCCTACAGTAACAGGAGAAGTGATTGGAATTTACCAGCCAAGCCATGAAGGATATCAACAAACACAGAAGCAGATTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTAGTAACTAGCTCATGGTCTACTTTCGGTTACGTGGCTCAGGGGCTTGGCGGTTTAAAACCATGGATACTCTACAAACCGGAGAATCGAACGGCCCCAAATCCGCCTTGTCGACGTGCAATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGTAAGGCTAAGAGAGGAACTGACACTGGTGAACTTGTTCCACATGTTAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1725 0.4087 MNLVMKRIIAMRNPRADNEDGNNKFSDLETTVTDKYATTSSPLTLMRLMGFFVISFMLFSVFFSLSVVLRDPPSDAAISSTTTLFQQHTQSQQQGFDGDAFDTVELLKDKLLGGLLADGFDEKSCLSRYQSVMFHKGLSGKPPSYLISKLKKYEARHKQCGPYTESYNKTVKELGSGQFSDSSDCKYVVWISFSGLGNRILTLASAFLYAILTDRVLLVDPGVDMTDLFCEPFPDASWFVPPDFPLNSQLNNFNQDSNQCHGKMLKTNSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQHFLQKVPWLIMKTDNYFVPSLFLMPSFEQELNDLFPKKDKVFHFLGRYLFHPTNNVWGLVVRYYNAYLAKVDERIGIQIRVFDTEPGPFQHVLDQILACTLKENILPDVNRGENIDSSSGTPKSKAVLMTSLNSGYFENVRDIYWEYPTVTGEVIGIYQPSHEGYQQTQKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04044 574 PANTHER FUCOSYLTRANSFERASE 2-RELATED 55 573 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre16g04044 574 Gene3D - 182 236 - -
Trre16g04044 574 Pfam Xyloglucan fucosyltransferase 108 545 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre16g04044 574 FunFam Galactoside 2-alpha-L-fucosyltransferase 183 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04044 Trre-Chr16 45643948 45646335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04044 21 572 Xyloglucan Fucosyltransferase1 AT2G03220 61.302 0.0 702