Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03991 ATGGGTAAATCACCGGGAAAATGGATCAAAACTGTACTGTTTGGGAAGAAATCTTCCAAATCAAATATACCAAGAGGAAGAGAGCTTGTTAATCAAAAGGAAGGAGTTGTTGCTTCCAAGGTTTCAGAAACTGGTTTAGCTTTAGAGCCAACAGCCAATACTATTCCCAGATGCGAGGAAGACTTGGAGCTGGAGAACAAAGAAGCAGAAAATGTTTTGCCTGGGAATCAAGAAATTGACACAGTGGAACCTGTTAATCAAGATGCACCAATTGATCCAGAGACATTGAGGCTGGAGGAAGCAGCCACGAAAGCTCAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCTTTTAGGGCCCTAAAAGGCATAATAAGGTTACAAGCACTTATTCGCGGACACTTGGTTAGAAGACAAGCTGTTGTTACATTATGCTGTATGTATGGAATTGTCAAACTACAAGCACTTGGTCGTGGACAAAGTGTTAGAAAGTCTGATGTCGGATTTGAAATTCAAGAGAAGTGCATTCTATTGAAGTTTCAGGATGACAAACCTGGCAAACCAATTACACTATCTGGTAAAATTATGAAGCTGTCAGCAAATACTTTCATTCGTAAGCTTATTGCTTCATCAACTACAATAATGGCCCTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGTTGGTCAGCATCTTGGTTTTGGAAGCCAATTCCTCAACCCAAGAAAATTCGGGATACGAAGCCTCAGAAAAAGCAGGGTAATATTTCAACTGGAGATGCTCAAACAAGCAAGTCAAAACGTACCCACAGGAAACTTCCTACTGCAAATCTTGACCTAGCCCCATCACAAGCAAATCCTGAAATTGAAAAACCAAAACGAAATGTAAGGAAATATCCAAGCCAACCCTCGGATCCTGTGCTGGAAAATCCCCAGATTGAGCTTGAGAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTGGAGACTGCAATTCTGTCAGAAGTTGAATCTGAGACTCTAAAGCCGAATGTGGAAAAGGAAACGGTTGCCTCCAGTGTTGATGTTTCAGAACCTGCGGTCATTAGTTCTAATGGGAAGATTAAGAAGGAAGCAACACTAACCATTTCCAGGGAGCCAGATATCGGAATTACTCATGGAGATTTGATCACTAAGGAGGTGTTTGACACTCCAAGCAGTTATCAGGTGAATGCGGAATCAAAGCCCTTGACAGATATTACAAGCAAAGATAAAAACATTTCTGACGAAGAAGTGAAAAATGATCCCATAGATTCAGTAGAGACTATTGGCAAAGATGAAAATTCTAATTTAACAAATGGAGGGTTGAGTCACAAGGAAGATCAAACGGGCAGTGAAAATCAGAAACCAGCCCGAAAAGCCTCAATTGTAGCTAAGCAGGAACGTGCAGAGAATGGTTTGCATAATAGTCCGACAATACCAAGTTATATGGCTGCAACTGAATCTGCAAAGGCAAAATTGAGGGCTCAAGGATCCCCAAAAGTTGGACAAGATGGAAGTGAGAAAAACAACAATGCTCGGCGACAGTCTCTGCCATCTTCAACTAATAGCAAAATCAGTTCTCATTCACCTAAAATACAGAGACCAACTCAATCAGGTGGTAAGGCGGGCCACAAAAGTGACAAAGCTGTATCATCTTCTAGAGATGGAAATGCGAAGGTAATTCAAGCAGAATGGAAGAGGTGA 1752 0.4172 MGKSPGKWIKTVLFGKKSSKSNIPRGRELVNQKEGVVASKVSETGLALEPTANTIPRCEEDLELENKEAENVLPGNQEIDTVEPVNQDAPIDPETLRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQALGRGQSVRKSDVGFEIQEKCILLKFQDDKPGKPITLSGKIMKLSANTFIRKLIASSTTIMALRLQYVPGDPNSVLSWLERWSASWFWKPIPQPKKIRDTKPQKKQGNISTGDAQTSKSKRTHRKLPTANLDLAPSQANPEIEKPKRNVRKYPSQPSDPVLENPQIELEKVKRNLRKVHNPVVETAILSEVESETLKPNVEKETVASSVDVSEPAVISSNGKIKKEATLTISREPDIGITHGDLITKEVFDTPSSYQVNAESKPLTDITSKDKNISDEEVKNDPIDSVETIGKDENSNLTNGGLSHKEDQTGSENQKPARKASIVAKQERAENGLHNSPTIPSYMAATESAKAKLRAQGSPKVGQDGSEKNNNARRQSLPSSTNSKISSHSPKIQRPTQSGGKAGHKSDKAVSSSRDGNAKVIQAEWKR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03991 583 Gene3D - 94 145 - -
Trre16g03991 583 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Trre16g03991 583 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Trre16g03991 583 PANTHER IQ-DOMAIN 5-RELATED 1 541 - -
Trre16g03991 583 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Trre16g03991 583 MobiDBLite consensus disorder prediction 420 444 - -
Trre16g03991 583 MobiDBLite consensus disorder prediction 409 583 - -
Trre16g03991 583 Pfam Protein of unknown function (DUF4005) 482 562 IPR025064 -
Trre16g03991 583 MobiDBLite consensus disorder prediction 518 556 - -
Trre16g03991 583 MobiDBLite consensus disorder prediction 445 463 - -
Trre16g03991 583 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
Trre16g03991 583 SMART iq_5 97 119 IPR000048 GO:0005515
Trre16g03991 583 SMART iq_5 120 141 IPR000048 GO:0005515
Trre16g03991 583 MobiDBLite consensus disorder prediction 247 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03991 Trre-Chr16 45106360 45110549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03991 1 583 IQD Protein Family AT1G74690 45.381 7.79e-130 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03991 - - gmx:100807118 837.795