Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g03968 | ATGGAAATCACCATTGTAGCTTGTTCTTTCTTACTCATTTTATCAACATTTTTCAACCCTTCTTCTCTTGCTCTCACTCAAGATGGTCAAACGTTGTTGGAGATCAAAAACACTTTGAATGACACAAAGAATGTTCTTAGCAACTGGCAAGAGTTTGATGAATCTCATTGTGCATGGACTGGAATCTCATGTCATCCTGGTGATGAACAAAGAGTTCGCTCAATAAATTTGCCATATATGCAGCTTGGGGGAATAATATCTCCCAGCATTGGTAAACTCAGTAGACTTCAGAGATTGGCGCTTCATCAGAATGGCTTGCATGGAATCATTCCTACTGAGATTACCAATTGTACTGAGCTTAGAGCCCTGTACTTGAGGGCTAATTTTTTCCAAGGAGGGATACCAGCTGGCATTGGCAACCTTTCATTTTTAAATATATTCGATGTATCAAGCAATGGATTAAAAGGAGCTATTCCTTCATCTATTGGCCGTCTCTCACATTTGCAAGTTTTGAACTTGTCTACCAATTTATTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTCCAGAAGAACTCGTTTTTTGGCAATTCCGGTCTTTGTGGAAGGCAAATACAAAAGCCATGTCGAACATCACTTGGTTTCCCTGTGGTGATACCACATGCCGAAAGCGACGAAGCTGCAGTCCCTACTACCAAAAGATCTTCACATTACATGAAGGCTGTGCTAATTGGGGCAGTGGTAACTTTGGGTCTCGCACTTATCATAACACTTTCATTACTCTGGATTCGTTCGACATCAAAGAAGGAAAGAGCTGCTAGGAAATACACAGAAGTCAAGAAGCAAGTAGATCCATCAGCAAGCGCTAAGCTTATTACCTTCCATGGTGATATGCCATACACATCATCTGAAATCATAGAAAAGCTGGAGTCTCTTGATGAAGAGGATATAGTAGGGTCAGGAGGATTTGGTACAGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGATTGACCGAAGTCGGGAAGGTTCTGATCAAGTGTTTGAAAGAGAACTAGAGATCTTGGGCAGCATCAAACACATAAATTTAGTAAATCTGCGTGGTTACTGCAGGCTACCTTCTTCAAGGCTACTTATCTATGATTATGTGGCCTTAGGCAGCTTAGATGATCTCTTGCATGAAAATACTGAACGACAACCCTTGAATTGGAATGATCGGCTAAAGATAACCCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGAATGTTCCCCAAAGATTGTGCACCGTGACATAAAGTCTAGCAACATCCTTCTTAATGAAAACATGGAGCCTCACATCTCTGATTTTGGTCTTGCAAAGCTCTTGGTTGATGAAGATGCACATGTTACCACGGTGGTAGCTGGCACATTCGGCTATTTGGCACCAGAGTATCTACAAAGTGGGAGGGCCACTGAGAAGTCAGATGTATACAGCTTTGGAGTTTTATTACTCGAACTTGTAACTGGAAAGAGGCCTACGGATCCTTCCTTTGTCAAGAGAGGTTTAAATGTTGTTGGCTGGATGAACACGTTATTGAAAGAAAACAGATTGGAAGATGTGGTAGACAGAAGATGCAGTGGTGTCGATGCTGAAACTCTTGAAGTAATTTTGGAGCTAGCAGCAAGATGTACCGATTCAAATGCAGATGACCGTCCTTCGATGAATCAAGTATTGCAGTTGCTGGAACAAGAGGTCATGTCTCCTTGTCCAAGTGAATTTTACGAGTCCCATTCAGATCACTGA | 1809 | 0.4196 | MEITIVACSFLLILSTFFNPSSLALTQDGQTLLEIKNTLNDTKNVLSNWQEFDESHCAWTGISCHPGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGIIPTEITNCTELRALYLRANFFQGGIPAGIGNLSFLNIFDVSSNGLKGAIPSSIGRLSHLQVLNLSTNLFSGEIPDIGVLSTFQKNSFFGNSGLCGRQIQKPCRTSLGFPVVIPHAESDEAAVPTTKRSSHYMKAVLIGAVVTLGLALIITLSLLWIRSTSKKERAARKYTEVKKQVDPSASAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYVALGSLDDLLHENTERQPLNWNDRLKITLGSARGLAYLHHECSPKIVHRDIKSSNILLNENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLKENRLEDVVDRRCSGVDAETLEVILELAARCTDSNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH | 602 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g03968 | 602 | Pfam | Leucine rich repeat N-terminal domain | 27 | 64 | IPR013210 | - | |
Trre16g03968 | 602 | ProSitePatterns | Protein kinases ATP-binding region signature. | 320 | 342 | IPR017441 | GO:0005524 | |
Trre16g03968 | 602 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 37 | 184 | - | - | |
Trre16g03968 | 602 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 390 | 595 | - | - | |
Trre16g03968 | 602 | ProSiteProfiles | Protein kinase domain profile. | 314 | 588 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g03968 | 602 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 435 | 447 | IPR008271 | GO:0004672|GO:0006468 | |
Trre16g03968 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 273 | 389 | - | - | |
Trre16g03968 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 391 | 593 | - | - | |
Trre16g03968 | 602 | SMART | serkin_6 | 314 | 588 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g03968 | 602 | Pfam | Protein kinase domain | 316 | 581 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre16g03968 | 602 | Gene3D | Ribonuclease Inhibitor | 25 | 213 | IPR032675 | - | |
Trre16g03968 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 296 | 584 | IPR011009 | - | |
Trre16g03968 | 602 | SUPERFAMILY | L domain-like | 25 | 188 | - | - | |
Trre16g03968 | 602 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 25 | 188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g03968 | Trre-Chr16 | 44894344 | 44906792 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g03968 | 7 | 592 | Receptor kinase-like Gene Family | AT2G35620 | 48.639 | 0.0 | 561 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIa | Trre16g03968 | Pkinase | 3.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g03968 | - | - | gmx:100803920 | 1046.57 |