Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03937 ATGTGGAATATTTTGAGAGAAGAACTAGTATTTGTAGGGCAAAACTATTATGACATAACCATAGTCTTATTTCTCTCTATAGGATTAACATATATTGCTTCAAGAGCTTGGAAAAGAGCTACAACAAATAGAGAAGATATCCCTGGTCAGCTTGGATTACCTCTTATTGGGGAGACTTTTTCTTTTCTTTCAGCCACTAATAGTACAAGAGGATGCTATGATTTTGTTAGACTTAGACGATTGTGGCATGGGAGATGGTTCAAGACAAGGTTATTCGGAAAGGTGCACATATTTATTCCTAATCCTGAAGGTGCAAGGACAATATTTGCTAATGACTTTGATCTATTCAACAAAGGTTATGTAAAATCAATGGCAGATGCTGTAGGAAAGAAAAGCTTATTATGTGTACCTGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCCCTATCTGCATTTATCACAAAGTTTGATAAATTGTTGTGTGGAAGGCTTCAAATGTTAGAAGACAGAGGGAAGAGTTTCAAGGTGTTGGACTTCTGCATGAAGATCACATTTGATGCAATGTGTGGTATGCTGATGAGCATCACGGACGATTCCTTACTACGACAGATCGAGAAAGACTGCACTGCTGTCTCTAATGCCATGTTGTCTTTCCCAGTCATGATTCCTGGAACCAGATACTATAAAGGCATCATGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAGATCATTGCTAGACGTAGGATGGGAGAAGAGTCTACAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTACCAGCTGGTGAAAAGCTTGATGACTCAGAGATTATGGATAATCTTTTGACATTGATAATTGCTGGACAGACTACTACAGCAGCAGCAATGATGTGGAGTGTAAAATTTCTACATGACAACAGAGATGCACAGGATATACTCAGGGAAGAACAACTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCATGAAGATATCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACACTGAGAATGGCTAATGTCCTATTATGGTTTCCTCGCGTCGCACTTAACGATTGTACAATTGAAGGGTATGAAATAAAGAAAGGTTGGCACGTTAACATTGATGCAACTTGTATACATTACGACTCAGATCTTTTCATTGATCCGTTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCCTTTGGATCAGGACCTAGGACTTGCCTTGGCATGAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGACTAACTAGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCAATAACGTTGAAGTCCATAAGCAAGAGCATGCCGGAGGCATAA 1479 0.3969 MWNILREELVFVGQNYYDITIVLFLSIGLTYIASRAWKRATTNREDIPGQLGLPLIGETFSFLSATNSTRGCYDFVRLRRLWHGRWFKTRLFGKVHIFIPNPEGARTIFANDFDLFNKGYVKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSMTSLSAFITKFDKLLCGRLQMLEDRGKSFKVLDFCMKITFDAMCGMLMSITDDSLLRQIEKDCTAVSNAMLSFPVMIPGTRYYKGIMARKRLMETFREIIARRRMGEESTGDFLQSMLQRDSLPAGEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNRDAQDILREEQLSLTKMKPEGASLNHEDINNMRYGLKVVKETLRMANVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFIDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISKSMPEA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03937 492 SUPERFAMILY Cytochrome P450 38 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 Pfam Cytochrome P450 48 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 CDD CYP90-like 79 482 - -
Trre16g03937 492 Gene3D Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03937 492 FunFam cytochrome P450 90A1-like isoform X1 37 485 - -
Trre16g03937 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Trre16g03937 492 PANTHER CYTOCHROME P450 26 48 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03937 Trre-Chr16 44486386 44490048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03937 48 457 Cytochrome P450 AT1G19630 46.618 2.15e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03937 - - gmx:100789430 872.078