Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03934 ATGGCGGCGCTGGCCGGAAGTTGGCCAGATTCGCGGCGGTGGTTGTCCGACGGTGTTGGAAGAGGAGTAGGAATATTAAGCAATAATCCTCAAGAGAATCTAGATTTTTTTAACTTGAATAGAGCGAAAATTCGTTACTGTGACGGTGCCTCTTTTACCGGGGATAGCGAAGATAGGGTAAATCTTAATCAACTTTGTGAATAG 204 0.451 MAALAGSWPDSRRWLSDGVGRGVGILSNNPQENLDFFNLNRAKIRYCDGASFTGDSEDRVNLNQLCE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03934 67 PANTHER NOTUM-RELATED 23 59 IPR004963 GO:0016787
Trre16g03934 67 Pfam Pectinacetylesterase 23 61 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03934 Trre-Chr16 44438963 44447112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03934 24 58 Carbohydrate Esterase AT2G46930 77.143 7.38e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03934 K19882 - han:110877942 67.781