Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03933 ATGTTAGGTGCAACTATTTTTTTGTTTAGGCTCTTCTTTCTGGATGCTCATCCTATTTTACACTGCGATGAATTTCAAAATCTATTCCCGGGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGCTTATTTCGTGATGTTGATGTAGCTGGTAGACATACCCTCAGGATTTTTTTCGACGGTGTTGTAACGTTACAGGGAGCACAGAAGAATCTTCCACGGAGTTGTACTAATCATCTTGATCCCTCCTCGGATATTAGGTCCATTCGACATAAGGTTGTGAAGATGTACACATCAAAGAAGAAAATCCGCAAAGATAAGGGTGTTTAG 330 0.4061 MLGATIFLFRLFFLDAHPILHCDEFQNLFPGTTKVKCLSDAGLFRDVDVAGRHTLRIFFDGVVTLQGAQKNLPRSCTNHLDPSSDIRSIRHKVVKMYTSKKKIRKDKGV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03933 109 PANTHER NOTUM-RELATED 19 84 IPR004963 GO:0016787
Trre16g03933 109 Pfam Pectinacetylesterase 19 82 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03933 Trre-Chr16 44438202 44438812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03933 19 84 Carbohydrate Esterase AT3G05910 68.657 6.92e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03933 K19882 - aew:130759200 110.538