Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03902 ATGAAAAACCTTGATGTTGCGGCTGCATACTGTTATTCTACCTTGCATATGATATGGCTGTTCTTTTTCTACCTTGTTTGTTTTGTCATTCTTGGAACATATGATATAAGTTCTTTAGAGTCTGGCTTCTCCATTTGTACAACGAAAAGAGCTTGTGTTTTCCTCTCACTTGTTTTCTTTAGATTCTTCTTAGGACTTGGAATTGGTGGTGATTATCGTTTATCTTCTACAATTATGTATGAGTTTGCTAATAAAAGGACAAGAGGGTCTTTTATAGCTGCTGTTTTTTCTATGCAAGGGTTTGGTATATTAGCTAGTGCTACGGTTACTATGGTGGTTTGCTCCATATTTCGCCGCGCTTCGAAGCCGACTTCAGCTTACGACGTGCCGCCAGAGGCCGATGTTGCTTGGAGGTTGATACTGATGATTGGTTCTGTTCCGGCTGCCTTGACTTACTATTGGCGTATGATGATGCCAGAAACTGCCAGATCCGGTGTGCATCCAACAATTTTGGGACTTAAGGTTATATTGGGTGTAAGCTTAAACAAGGAGCATGCTTCAGGGATTGCAGGGATTGTGCATCAAGGAATAAACCATAAATGTTTGCTCTAG 612 0.4101 MKNLDVAAAYCYSTLHMIWLFFFYLVCFVILGTYDISSLESGFSICTTKRACVFLSLVFFRFFLGLGIGGDYRLSSTIMYEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSIFRRASKPTSAYDVPPEADVAWRLILMIGSVPAALTYYWRMMMPETARSGVHPTILGLKVILGVSLNKEHASGIAGIVHQGINHKCLL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03902 203 ProSitePatterns Sugar transport proteins signature 2. 63 88 IPR005829 GO:0016020|GO:0022857|GO:0055085
Trre16g03902 203 SUPERFAMILY MFS general substrate transporter 18 164 IPR036259 -
Trre16g03902 203 Gene3D MFS general substrate transporter like domains 19 182 IPR036259 -
Trre16g03902 203 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 41 163 - -
Trre16g03902 203 Pfam Sugar (and other) transporter 52 163 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre16g03902 203 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 203 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03902 Trre-Chr16 44166159 44167675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03902 37 163 Inorganic Solute Cotransporters AT1G76430 67.407 6.15e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03902 K08176 - cave:132189752 181.8