Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03882 ATGTCTAACTCACACTTAATTTTCTGTTTTCTTTCTTGCATTCTTGCTCTCACTTTGATCTTCATTTTTTTCATCAAAAAAAAGAAAACAAAGTTTAATCTTCCACCTGGAAAAATGGGATGGCCCTTTATTGGAGAAACCATTGGTTATTTGAAGCCTTACACTGCCACCACAATGGGAGAATTTATGGAAAATCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGAGGACCAGCTATTGTATCAGCAGATGCAGAATTGAACAAATTCATATTACAAAATGATGGAAAATTATTTGAGTGTAGCTATCCTAAAAGCATTGGTGGAATACTTGGAAAATGGTCAATGTTGGTTTTAGTAGGTGACATGCATAGGGACATGAGGAATATTTCACTAAACTTTATGAGCTATGCTAGGCTTAAAACACATTTTTTGAAAGATATAGAGAATCACACTCTTTTGGTTCTTAGCTCTTGGAAAGAAAATTGTACATTTTCAGCTCAAGGTGAAGCAAAAAAGTTCACCTTCAATTTGATGGCCAAACAAATTATGAGTTTGGATCCATGGAATCTTGAGACAGAACAGTTGAAAAAAGAGTATGTCTCTTTCATGAAAGGTGTTGTTTCTGCTCCTTTAAATTTGCCAGGAACTGCATACAGGAAAGCATTAAAGTCTAGAAATACCATATTGAAGTTTATAGAGAGGAAAATGGAAGAGAGAAGAAAGAGAAACCAAGAAGGAAAAAAAGGGTTGGAGGAAAATGATCTTCTAAATTGGGTTCTAAAGCATTCAAATCTTTCCAATGAGCAAATTCTTGATTTGATTCTAAGCTTGCTTTTTGCTGGTCATGAAACTTCATGTGTAGCTATATCTCTAGCTATTTATTTTTTGCCTGGTTGTCCTCGAGCCATACAGCAATTAAGGGAAGAACATAGAGAAATAGCCAGATCCAAGAAGAAATCAGAGGAGGTTGGATTAACTTGGGATGATTATAAAAGAATGGAATTTACTCATTGTGTTGTGAATGAAACACTTCGGTTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATCAAAGATGTTCAGTACAAAGGTTATGACATTCCATGTGGATGGAAAGTACTTCCGGTGATTTCAGCTGTGCATTTGGATCCTTCAAATTTTGATCAACCTCAACACTTCAATCCATGGAGATGGCAGGTAAGTTCTACTTATAATCGTTCTTTTAATTGCACTTAG 1254 0.3549 MSNSHLIFCFLSCILALTLIFIFFIKKKKTKFNLPPGKMGWPFIGETIGYLKPYTATTMGEFMENHIARYGTIYKSKLFGGPAIVSADAELNKFILQNDGKLFECSYPKSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLKTHFLKDIENHTLLVLSSWKENCTFSAQGEAKKFTFNLMAKQIMSLDPWNLETEQLKKEYVSFMKGVVSAPLNLPGTAYRKALKSRNTILKFIERKMEERRKRNQEGKKGLEENDLLNWVLKHSNLSNEQILDLILSLLFAGHETSCVAISLAIYFLPGCPRAIQQLREEHREIARSKKKSEEVGLTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDVQYKGYDIPCGWKVLPVISAVHLDPSNFDQPQHFNPWRWQVSSTYNRSFNCT 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03882 417 Coils Coil 308 328 - -
Trre16g03882 417 PANTHER CYTOCHROME P450 26 31 408 - -
Trre16g03882 417 Gene3D Cytochrome P450 24 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 Pfam Cytochrome P450 35 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 SUPERFAMILY Cytochrome P450 31 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03882 417 CDD CYP90-like 66 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03882 Trre-Chr16 43908496 43911272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03882 26 405 Cytochrome P450 AT3G50660 72.070 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03882 K09587 - gmx:100802498 669.077