Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03849 ATGGAAAAACTAATTTGTATGGAAAATTCTCAATGTGATATAATGAAACTAGATGATGAATCTAGTGACGATTCATTACTGGTAATGCAAGTACCAACTCAGGTTGAAAATGAAGTTCAAGTTGAAGAGAATGTTGATTTTATTGGTCAAGTAGAAAATCAAGTTCAAGCTCAAGAGAATCATATCAATGGTCAGGTTGAAAACCAAGTTCAAGTGCAAGTGCAAGAGAATGTTAATAGAGTGGCAGTCAATCCTGTAGATTCTGAGATCTTGTCTAGCAATGGATTGGCTATTCAAATATTTGAAGAACCTGGTTCTACAGATCGACAATGCAGAGCGTATATCGAAGCCAAGGGAAGGCAGTGTGCGAGAATGACAATTAGTAATGATATATACTGTTGTGCGCATTTCTCAAGTAAAAAAAGAAAATGTGTTGACGTTCGTACCAACAACAAAGAGGAAATAGGTTTAACTACTAACCAATATTTTCATGGTGAAACATCAAGAAACAACAACAAAAAAGAGTTAATTAAGGTCGATGAGCCTGTGGCTGTGTGGTTCAAGCTTGAGTGTGGAGAGAAGTGGAATGCAGGCATCAAATGTGCAAGGGTTGATTGGCCACTATCACTTATAAGAGGCAAACCAACTAATGATAATCAAAACAAATATTTTGTCATTTTTTCTCCAGAAACAATGAGTTATTTATGGGTTGATATGCTTTTTGTTCAATTAATTCACGAGTTTCCTCAACCCATAGCATATGAAACTCATCAAGATGGAATTGATATTGTACAAGACTTCACTATTGCACAACAATTTATAATGCAAAAGCTTGCCGGTGACATGCTTCATCTTGTGCATCTAATTCATTATAATGCTTTGATAGAATCTGCTCGACATGTGATTGTTTGGAAGCAGTTTGGTATGGAAGCATATAATTGTCACACTTATTCAGAACTTGGAAGAATGGTTAAGAAGCTGCAAAATAACATAATGCAGCAATATATAAAGGCTAATTGGAAACTTCATTCCTATAAGTCTTGGGCTGAAAGATGCAAGAAAGCAAATAATGCAGAGACAATAGAGCTGCTTCAAGAGGTAATAATGATATATAATTTTGGCATCTAA 1128 0.352 MEKLICMENSQCDIMKLDDESSDDSLLVMQVPTQVENEVQVEENVDFIGQVENQVQAQENHINGQVENQVQVQVQENVNRVAVNPVDSEILSSNGLAIQIFEEPGSTDRQCRAYIEAKGRQCARMTISNDIYCCAHFSSKKRKCVDVRTNNKEEIGLTTNQYFHGETSRNNNKKELIKVDEPVAVWFKLECGEKWNAGIKCARVDWPLSLIRGKPTNDNQNKYFVIFSPETMSYLWVDMLFVQLIHEFPQPIAYETHQDGIDIVQDFTIAQQFIMQKLAGDMLHLVHLIHYNALIESARHVIVWKQFGMEAYNCHTYSELGRMVKKLQNNIMQQYIKANWKLHSYKSWAERCKKANNAETIELLQEVIMIYNFGI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03849 375 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 46 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03849 Trre-Chr16 43463773 43466225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03849 165 366 C2H2 Transcription Factor Family AT2G23740 44.059 2.00e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03849 - - tpra:123922793 447.588