Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03836 ATGAGGAAGTGGACGATCCCTTTCGTTCTTCTTCTTCTTCTTCTCTCTCTTTTCCTTCTCTTCGCAGATCAAGGTCAAAAGTTTCAAGCGAATGCGGAAGGTAATTCCGATGAGCTTGTAGATCCACCGAAGGTGGATGATAAGATTGGCGCTGTTCTCATGGAGTTTCAACAGATTCAGATGTGGTTAAGAGGGAATTGGAATCGGAATCGATCTCCAAGAGATTGCTTCGGAGTGAAGATTAAGTTAGATAACGAAAAGAAAATTCTATCTATTAGAGATAGAGGTATTGGTATGACAAAGGAGGATTTAGTGAATAATTTGGGTACCATAGCTTTGGAACTTCAGGTGTGTTGCATCTTCTATGCCTATTACTTGGTGGATTTTCTTAATAGCCACCACCGGAAATGCTTGGCCCAACATCATCTAATAAACTTAAAGAAGGCAGTAATTGCCACCCAATGTGCATGGAGAGGAAAAGTCGCTTGGCGAGAACTACGAAATCTCATATGGTTTGCTTGGAGACATAGTTCTTGCAGATGA 543 0.4125 MRKWTIPFVLLLLLLSLFLLFADQGQKFQANAEGNSDELVDPPKVDDKIGAVLMEFQQIQMWLRGNWNRNRSPRDCFGVKIKLDNEKKILSIRDRGIGMTKEDLVNNLGTIALELQVCCIFYAYYLVDFLNSHHRKCLAQHHLINLKKAVIATQCAWRGKVAWRELRNLIWFAWRHSSCR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03836 180 Gene3D - 38 141 IPR036890 -
Trre16g03836 180 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 76 112 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03836 Trre-Chr16 43366820 43369056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03836 130 169 Myosins gene family AT1G04600 55.000 3.27e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03836 K09487 - cpap:110813481 89.3521