Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03758 ATGGGTCTCTGCACTTCAAAACCAAATTCTGAACCTCACAATAACATAATCATTCAATTACAACAAGAAATCACTGTTAATTCTGATTCAAATCCAGTAGTTGAAATTCAAAACCCTAAAAAATCACCTTTTTTCCCTTTTTATACTCCAAGTCCAGCTAATCATTTTTTCTCCGGCAAGTTTCCTAAAACTCCGGCGACTCCAAGGAGATTCTTTAAACCAGCGTCTCCGGCAAAGCACATTAGGTCGTTGCTTGCTCGGCGTCATGGTTCCGTTAAGCCGAATGGCGGTGCTAGTATTTCTGAAGGGAGTGAAGGTGAAGGTGTTGCTCCTCTTGATAAGAATTTTGGATTTTCTAAGCATTTTGGTAGTAAATATCAACTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTGTTGTTAAGGTTAATCATAAGGGTGAGATTAAGGGTCATAGTGTTGCTGTTAAGGTTATTCAGAAAGTTAAGATGACTACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACACAGAAATTTGATTAAATTCTATGAGGCTTATGAAGACCATGATAATGTCTATATAGTCATGGAGTTGTGCGAAGGAGGCGAGCTTTTGGACAGAATTCTATCGAGAGGTGGGAAATACTCAGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATCTACAAGGTGTTGTTCATCGTGATCTTAAACCTGAGAACTTCTTGTTTTCAACCAAAGACGAGAACTCAGAGCTGAAGGCGATAGATTTTGGTTTGTCTGATTTTGTCAAACTGGATGAACGGCTTAATGATATCGTTGGTAGCGCATACTATGTGGCTCCCGAGGTTCTGCATAGAGCTTACAATACGGAGGCTGACACATGGAGTATTGGCGTGATTGCATATATTTTATTATGCGGCAGTCGTCCATTTTGGGCACGGACTGAATCCGGGATCTTTCGTTCCGTATTGAAAGCTGATCCAACTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGATGAGGCACAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACTGCAGCACAGGCATTAGGTCATCCATGGATTAAAAGTTATAAGATTGTAAAAGTACCCCTGGATATTTTAGTGTTCAAGCTCATGAAGTCATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAGCTACTGATGAGCTGAATTATTTGAAGGAGCAGTTTTCACTTTTAGAACCAAACAAAAATGACACCATTAGCTTGGAAAATATCAAAGCGGCCTTGATGAAGAATGCAACAGATGCTATGAAGGAGTCTCGCATTCCTGATCTTCTGGCATCACTCAATGCCTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGACCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATAATGATCGAGGAACTAGCTTCGGAGCTTGGCCTTGGCCCATCAGTACCTGTTCATGCTGTTCTTCATGACTGGATAAGGCACACCGATGGAAAGTTAAGCTTCCTAGGGTTTGTTAAGTTGCTACACGGTCCATCTCGAAGTCTTGTAAAACCTCCTCAGTAA 1752 0.4092 MGLCTSKPNSEPHNNIIIQLQQEITVNSDSNPVVEIQNPKKSPFFPFYTPSPANHFFSGKFPKTPATPRRFFKPASPAKHIRSLLARRHGSVKPNGGASISEGSEGEGVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSAVVKVNHKGEIKGHSVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHRNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYNTEADTWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPTFDEPPWPSLSDEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYKIVKVPLDILVFKLMKSYMRSSSLRKAALRALSKTLATDELNYLKEQFSLLEPNKNDTISLENIKAALMKNATDAMKESRIPDLLASLNALQYRRMDFDEFCAAALSVHQLEALDRWDQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPPQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03758 583 Gene3D - 431 500 - -
Trre16g03758 583 Gene3D Transferase(Phosphotransferase) domain 1 218 401 - -
Trre16g03758 583 SUPERFAMILY EF-hand 419 573 IPR011992 -
Trre16g03758 583 FunFam CDPK-related kinase 1 428 500 - -
Trre16g03758 583 Gene3D - 409 570 - -
Trre16g03758 583 Gene3D Phosphorylase Kinase; domain 1 119 217 - -
Trre16g03758 583 SUPERFAMILY Protein kinase-like (PK-like) 123 420 IPR011009 -
Trre16g03758 583 ProSiteProfiles Protein kinase domain profile. 126 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03758 583 FunFam CDPK-related kinase 3 118 293 - -
Trre16g03758 583 SMART serkin_6 126 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03758 583 FunFam Calcium-dependent protein kinase SK5 301 396 - -
Trre16g03758 583 Pfam Protein kinase domain 126 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03758 583 FunFam CDPK-related kinase 1 119 217 - -
Trre16g03758 583 CDD STKc_CAMK 125 390 - -
Trre16g03758 583 ProSitePatterns Protein kinases ATP-binding region signature. 132 161 IPR017441 GO:0005524
Trre16g03758 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 112 557 - -
Trre16g03758 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03758 Trre-Chr16 42364723 42368015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03758 1 580 EF-hand Containing Proteins AT3G50530 71.609 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre16g03758 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03758 K00924 - gmx:100803313 934.095