Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03731 ATGGAGAAGAAGATGACTCAATTGGGAAAGAGAACAAGAAGATCTCAAGCACCTCAAATAATGTCCAATGAACCTCCGTCAACCAAAAATATTAATAGTGCCACCGTGAACGTATTCGCTCGTCCGCCGGTTGACGAATGCTACTCGAGTATCACCCAGGAATCATCCTCCGCATCGTGTTGTTCCAGTAACAAACTCTCCGATGGAGAGGTTGAGAGTGCGCAAGTTGAAACGTTGACGTGCATTGGTGATCAAATTATAAGGAGAAGAGAGATGGGTTTGTTAAACGAGGTAGTTGGAACGAATTCTACAGAGCAAGAGGAAGAAGAAGTTGATTCAGCTGAGAATAAGCCGCAAAAGATGCCAACGGAATCTGAACTTGATGAATTTTTCTCTGCAGCTGAAAAACATGTTCAGAAACAGTTTCAAAACAAGTATAATTTCGACATTGCGAAGGACATGCCTTTGGAAGGACGTTATGAGTGGGTTCAATTGAAGCCATAA 504 0.4246 MEKKMTQLGKRTRRSQAPQIMSNEPPSTKNINSATVNVFARPPVDECYSSITQESSSASCCSSNKLSDGEVESAQVETLTCIGDQIIRRREMGLLNEVVGTNSTEQEEEEVDSAENKPQKMPTESELDEFFSAAEKHVQKQFQNKYNFDIAKDMPLEGRYEWVQLKP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03731 167 Gene3D p27 109 167 IPR044898 -
Trre16g03731 167 MobiDBLite consensus disorder prediction 99 125 - -
Trre16g03731 167 MobiDBLite consensus disorder prediction 11 32 - -
Trre16g03731 167 Pfam Cyclin-dependent kinase inhibitor 121 165 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre16g03731 167 MobiDBLite consensus disorder prediction 1 32 - -
Trre16g03731 167 PIRSF CKI_KRP_plant 2 167 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre16g03731 167 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 8 166 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03731 Trre-Chr16 41822379 41824107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03731 122 167 Core Cell Cycle Gene Families AT1G49620 67.391 4.78e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03731 - - mtr:120577329 131.724