Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03705 ATGGATTGGGTACGAGGAGAAACAATTGGTAGAGGAAGCTTTGCAACAGTTAATTTAGCTATACCCAAAGGAAAATCCAATTCAAATTCCACTCTTTTTCCTTCTCCGACAGCCGTTAAAACATCGGAGGTTTCAACCTCGTATTCACTCAAAAACGAGAAACAAGTTCTCAATTGTTTAGGTTCACACAAACGAATCATTCGTTGTTTCGGAGATGATCATACATTTGAGAATGGCGAAAAGTGTTACAATTTATTCCTTGAATACGCTTCCGGCGGCACACTCGCCGATCAAGTGAAATTCCACGGTGGCCGGATTGCTGAACAAGATATTCGACGTTACACGAGGGCAATTGTTGAAGGGGAAAAACAGAGGTTTGAATGCAGGGGAACTCCACTTTTTATGTCGCCGGAAATGGTGAACGGCGGCGAGCATGAGTCGCCGGCGGATCTTTGGGCACTTGGATGTGCGGTGGTGGAAATGGTAACTGGAAAACCAGCATGGAATTTAGAGAAAGACTCGAATATGTGGTCATTGTTACGTCGAATTGGTGCCGGAGAAGAATCGCCGGTGATACCAGAAGAGTTATCGAAAGAGGGAAAAGATTTTGTTGAGAAGTGTTTTGTGAATGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTATTGAAGAAATGAAGAATGTTAATGAATCATCACCAAGAACTCACTTTGATTTCAATGATTGGATTTCTAATGTTAGTGATTCGGTTCCAAATTCACCGGAATCTGAAGAGTTTTGTCAATGGGATGTTGATTCTAGTTTTTGTTCCGCGGCGGATCGGCTCCGGCAGCTTGTGACGGTTGAAGGGCTGATTAATTGGTCGGAATCAGAGAGTTGGATTAGTGTTAGGTGA 909 0.429 MDWVRGETIGRGSFATVNLAIPKGKSNSNSTLFPSPTAVKTSEVSTSYSLKNEKQVLNCLGSHKRIIRCFGDDHTFENGEKCYNLFLEYASGGTLADQVKFHGGRIAEQDIRRYTRAIVEGEKQRFECRGTPLFMSPEMVNGGEHESPADLWALGCAVVEMVTGKPAWNLEKDSNMWSLLRRIGAGEESPVIPEELSKEGKDFVEKCFVNDPRKRWTAEMLLNHPFIEEMKNVNESSPRTHFDFNDWISNVSDSVPNSPESEEFCQWDVDSSFCSAADRLRQLVTVEGLINWSESESWISVR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03705 302 Pfam Protein kinase domain 128 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03705 302 Pfam Protein kinase domain 5 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03705 302 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g03705 302 SUPERFAMILY Protein kinase-like (PK-like) 2 259 IPR011009 -
Trre16g03705 302 ProSitePatterns Protein kinases ATP-binding region signature. 9 40 IPR017441 GO:0005524
Trre16g03705 302 Gene3D Transferase(Phosphotransferase) domain 1 122 249 - -
Trre16g03705 302 Gene3D Transferase(Phosphotransferase) domain 1 2 121 - -
Trre16g03705 302 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03705 Trre-Chr16 41437135 41438160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03705 1 302 MAP Kinase Kinase Kinase AT4G36950 46.307 2.12e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre16g03705 Pkinase 9.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03705 - - gmx:100799752 373.244