Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03698 ATGGATATGTATATTACCAAGGAAGAGAAAGAGCGAAACGTACCCATTCCATACAGAGATAGCGGTCACATGTCTCTACTTAAGAGTGATGCACTTTATAAATATATACTTGAAACCAGTGTCTTGCCAAGAGAGCATCCATGTCTAAAGGAGCTCCGTGAGATGACCGATAAACATCCACTGAACCTTATGGCTACATCAGCTGATGAAGGGCAATTTATAAGCTTGTTGGTTAAGCTAATCAATGCAAAGAACACAATGGAAATCGGTGTTTACACCGGTTACTCTCTACTATGCACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTGTTGGCTTTGGACATTAGTCGTGAATACTATGAGTTGGGATTGCCCATAATTGAAAAAGCTGGCGTGGCTCACAAGATTGATTTTAGAGAAGGACCTGCGCTTCCTCTTCTTGACCAACTTCTTCAAGATGAAAATAACAAGGGAACATTTGATTTTATTTTTGTGGATGCTGATAAGAATAACTACTTAAACTATCATAAGAGAGTGATTGAACTTGTCAAAGTTGGAGGATTGATTGGATACGATAATACCTTATGGACTCGATCGGTTGCGCTTGCACCTGATGCACCTATGTTGGAATTCATTAGAGGTTATCGTGGTTATGTGATTGAGGTCAACAAGTATCTTGCTCAAGATTCAAGGATTGAGATTTGCCAACTTGCAGTAGGTGATGGAATTACCTTATGTCGTCGCATTAGTTAA 753 0.3997 MDMYITKEEKERNVPIPYRDSGHMSLLKSDALYKYILETSVLPREHPCLKELREMTDKHPLNLMATSADEGQFISLLVKLINAKNTMEIGVYTGYSLLCTALALPSDGKVLALDISREYYELGLPIIEKAGVAHKIDFREGPALPLLDQLLQDENNKGTFDFIFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWTRSVALAPDAPMLEFIRGYRGYVIEVNKYLAQDSRIEICQLAVGDGITLCRRIS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03698 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 25 249 IPR002935 GO:0008171
Trre16g03698 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 248 IPR029063 -
Trre16g03698 250 Gene3D Vaccinia Virus protein VP39 17 250 IPR029063 -
Trre16g03698 250 PANTHER O-METHYLTRANSFERASE-RELATED 23 249 - -
Trre16g03698 250 CDD AdoMet_MTases 88 189 - -
Trre16g03698 250 FunFam Caffeoyl-CoA O-methyltransferase 1 18 250 - -
Trre16g03698 250 Pfam O-methyltransferase 39 249 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03698 Trre-Chr16 41362208 41363679 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03698 8 250 Monolignol Biosynthesis Gene Families AT4G34050 69.959 4.09e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03698 K00588 - gmx:100305498 373.244