Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03694 ATGAATTGTGTATCCAAGAGAACATGTGTGTTTAAAAGAGCTCCGACAGATAAACAACCACAGAGCCGCATGGCTACACCCGCTGATGAAGGACAACTTATAAGCATGTTGGTTAAGCTAATAAATGCAAAAAACACAATGGAAATTGGTGTGTACACAGGTTACTCTCTGCTCTCTACAGCTCTTGCTCTTCCCTCTGATGGAAAGGTAGTGGCTTTGGATATTAGTCGTGAATTCTATGAGTTGGGATTGCCTATGATTAAAAAAGCTGGAGTGATTCACAAGATTGACTTTAGAGAAGGACATGCACTCTTTCTTCTTGACCAACTTCTTCAAGATGAAAATAACAAGGGGACATTTGATTTTGTTTTTGTGGATGCTGATAAGGATAATTACATAAACTATCATAAGAAGGTTGATTGA 423 0.383 MNCVSKRTCVFKRAPTDKQPQSRMATPADEGQLISMLVKLINAKNTMEIGVYTGYSLLSTALALPSDGKVVALDISREFYELGLPMIKKAGVIHKIDFREGHALFLLDQLLQDENNKGTFDFVFVDADKDNYINYHKKVD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03694 140 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 140 IPR002935 GO:0008171
Trre16g03694 140 Pfam O-methyltransferase 14 138 IPR002935 GO:0008171
Trre16g03694 140 CDD AdoMet_MTases 48 127 - -
Trre16g03694 140 PANTHER O-METHYLTRANSFERASE-RELATED 16 138 - -
Trre16g03694 140 Gene3D Vaccinia Virus protein VP39 8 139 IPR029063 -
Trre16g03694 140 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 138 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03694 Trre-Chr16 41347153 41349562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03694 8 139 Monolignol Biosynthesis Gene Families AT4G34050 65.248 4.26e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03694 K00588 - gmx:100795858 203.756