Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03691 ATGGCTATCAATAGTAATGAAGAGAAACACGAAAACCAACCCATTGGATACAAAGTATACAGTGATCTCTCTCACAAGACTCTTCTTCAGAGTGATACACTATATAAGTATATACTCGAAACAAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAGCTTCGTGAGATGACAGATAAACAACCACTGAGCCTTATGGCTACACCAGCTGATGAAGGACAACTTATAGGCATGTTGGTTAAGCTAATAAATGCAAAAAACACAATGGAAATTGGTGTGTACACAGGTTACTCTCTGCTCTCTACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTGGACATTACTCGTGAATACTATGAGTTGGGATTGCCTATGATTGAAAAAGCTGGAGTGGACCACAAGATTGACTTTAGAGAAGGACCTGCTCTCCTTCTTCTTGACCAACTTCTTCAAGATGAAAATAACAAAGGGACATTTGATTTTGTTTTTGTGGATGCTGATAAGAATAATTACATAAACTATCATAAGAAGGTGATTGATCTTGTAAAAGTTGGGGGATTAATTGGATATGATAACACCTTATGGAGTGGATCAGTTGCACTTCCACCTGATGCACCTATGTTAGAGATCATTAGAAACTATCGTGGTCATGTGGTTGAGGTTAACAAGTATCTTGCTCAAGATTCAAGGATCGAAATTTGTCAGCTCACAGTAGGTGATGGAATTACCCTTTGCCGCCGAATTAGTTGA 759 0.3913 MAINSNEEKHENQPIGYKVYSDLSHKTLLQSDTLYKYILETSVFPREHPCLKELREMTDKQPLSLMATPADEGQLIGMLVKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDITREYYELGLPMIEKAGVDHKIDFREGPALLLLDQLLQDENNKGTFDFVFVDADKNNYINYHKKVIDLVKVGGLIGYDNTLWSGSVALPPDAPMLEIIRNYRGHVVEVNKYLAQDSRIEICQLTVGDGITLCRRIS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03691 252 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 27 251 IPR002935 GO:0008171
Trre16g03691 252 PANTHER O-METHYLTRANSFERASE-RELATED 24 251 - -
Trre16g03691 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 32 250 IPR029063 -
Trre16g03691 252 FunFam Caffeoyl-CoA O-methyltransferase 1 20 252 - -
Trre16g03691 252 Pfam O-methyltransferase 41 251 IPR002935 GO:0008171
Trre16g03691 252 Gene3D Vaccinia Virus protein VP39 16 252 IPR029063 -
Trre16g03691 252 CDD AdoMet_MTases 90 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03691 Trre-Chr16 41322131 41325138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03691 20 252 Monolignol Biosynthesis Gene Families AT4G34050 70.815 3.77e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03691 K00588 - gmx:100305498 386.726