Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03690 ATGGCTGCCAATAATGAAGAGAAACAGAAAAACAAACCCATTGGACTCATTGATCTCTCTCACAAGACTCTCCTTCAGAGTGATGCACTATATCAGTATATACTTGAAACAAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGACCTTCGTGAGATGACAAATAAACATCCTCGGAACCTTATGGCTACACCTGCTGATGAAGGACAACTTATAAGCATGATGATTAAGCTCATAAATGCAAAGAATACGATGGAAATTGGAGTATACACTGGTTACTCTTTACTATCTACTGCTCTTGCTCTACCCTCTGATGGAAAGGTATTGGCTTTGGACGTGAATCGTGAATACTATGAGCTAGGATTGCCCATAATTGAAAAAGCTGGCGTGGCTCACAAGATTGACTTTAGAGAAGGAGCTGCTCTCCCTCTTCTTGACCAACTTCTTCAGAATGAAAACAACAAGGGAACATTTGACTTTGTTTTCGTGGATGCTGATAAGAATAACTACTTAAACTATCACAAGAGGGTTATTGATCTTGTGAAAGTTGGGGGATTGATCGGATACGATAATACCTTATGGAGTGGATCGGTAGCGGCTCCGCCTGATGCACCTATGTTGGATTACATTAGGCATATGCGTGATCATGTGATTGAACACAACAAGTATCTAGCTCAAGATTCGAGGATCGATATATGTCAACTCCCAGTAGGTGATGGGATTACCCTGTGTCGCCGCACCAATTGA 747 0.415 MAANNEEKQKNKPIGLIDLSHKTLLQSDALYQYILETSVFPREHPCLKDLREMTNKHPRNLMATPADEGQLISMMIKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDVNREYYELGLPIIEKAGVAHKIDFREGAALPLLDQLLQNENNKGTFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWSGSVAAPPDAPMLDYIRHMRDHVIEHNKYLAQDSRIDICQLPVGDGITLCRRTN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03690 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Trre16g03690 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Trre16g03690 248 Pfam O-methyltransferase 37 246 IPR002935 GO:0008171
Trre16g03690 248 Gene3D Vaccinia Virus protein VP39 15 247 IPR029063 -
Trre16g03690 248 PANTHER O-METHYLTRANSFERASE-RELATED 20 247 - -
Trre16g03690 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Trre16g03690 248 CDD AdoMet_MTases 86 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03690 Trre-Chr16 41260966 41267198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03690 4 246 Monolignol Biosynthesis Gene Families AT4G34050 70.782 2.74e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03690 K00588 - gmx:100305498 410.609