Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03688 ATGGGTTTCACTATTAACCACGCTGTTTGTGATGGTAAATCGTTTTGGCATTTCGTTAATTCTTGGTCACAAATCTCAAAAGGTTCTCACAAAATAACCAAAATACCCTCACTTCAACGTTGGTTCCCAAACAACATTGAAACTCCAATACTCTTTCCTTTCACAATAACAGAATCAAAATCACAAGATCAACGGTCGAAGCTTCCAGAAAGAATCTTCCATTTTACGAAAGAGAAACTAAAAGAACTAAAATCAAAAGCTAATGAAGAAGTCAACACTGACAAAACCAAAACTAATATCTCTTCGCTTCAAGCGCTATTATCTCATGTTTGGCGTTCGGTTGTTCGATGCAAAAAACTCGATCCACAAGAAGATTTTCGCTATATATTACCAATAGGAGTTAGACCAAGGATGAATCCGCCACTTGACGAAGATTATTTTGGAAATGCTGTAGTGATTGGTGATGTGAGGATGAAAGTAGGGGAGGTTATGGAATGTGGGATTGGAAAAGTTGCTCTGGAGATGAATAAGATGATTGCATTACATACCGATGAGAAAATAAAGATTGATTATGGTTGTTGGTTGAGAATGCTGAGGTTGCTTTCGACTGATAGTTTGACGAGTGGTAATTCGTTGGCGACGAGTAGTTCTCCGAGGTTTAATGTTTATGGTAATGATTTTGGTTGGGGAAAGCCTGTTGCGGTTCGAAGTGGGGATCAGAATAAAAATAATGGGAAGATTACTTTGTTTGAAGGGGTTGATGAAGGTAGTATTGATATTGAAGTTTGTCTTTCTTATGAGATTTTAGAGGCTTTGGGAAATGATACTGAGTTTGTGGTTCCAATTTCTAAGTAA 855 0.3743 MGFTINHAVCDGKSFWHFVNSWSQISKGSHKITKIPSLQRWFPNNIETPILFPFTITESKSQDQRSKLPERIFHFTKEKLKELKSKANEEVNTDKTKTNISSLQALLSHVWRSVVRCKKLDPQEDFRYILPIGVRPRMNPPLDEDYFGNAVVIGDVRMKVGEVMECGIGKVALEMNKMIALHTDEKIKIDYGCWLRMLRLLSTDSLTSGNSLATSSSPRFNVYGNDFGWGKPVAVRSGDQNKNNGKITLFEGVDEGSIDIEVCLSYEILEALGNDTEFVVPISK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03688 284 Coils Coil 77 97 - -
Trre16g03688 284 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 278 - -
Trre16g03688 284 Gene3D - 59 274 IPR023213 -
Trre16g03688 284 Pfam Transferase family 1 278 - -
Trre16g03688 284 Gene3D - 1 58 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03688 Trre-Chr16 41237745 41238599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03688 1 267 Monolignol Biosynthesis Gene Families AT5G48930 25.614 7.45e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03688 - - lja:Lj0g3v0319259.1 354.755