Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03628 ATGAGTAATACTAAAAATGAACAATCTCTTGCTACTGTAAATATGTTGAGGGATAGAGTATCTAAGGCTACTTTAGGAGCTGTTGCTGACTTGGGTAAGAATGGTGTCCTTTTTGGAGACAAGATTTCCGATATTCCTTTTAGGAGGCAAGGAGTTCTTGCTGGACGGATATTTCTTCTACAACTTTCATTAGGATGTTTGACTTTACCTGATGGATGTGCATATGATGGCATGTGGCGGTATGGAAAAAGATCAGGTTTAGGTTTTTTCTACTTCAATAATGCTGAGCGCTATCAGGGTTCATGGAGGGATGACATGATGCATGGGAAGGGTTGGCTTTATTTTCAATCTGGCGACAGATGTTTGCAAACTTTTGGTGATATCTTCTTTGGTCACTTCAAAGATGGTTGGCAAAATGGGGAGTTTCTTCATGTTAGTGTTGATGGTACAAGATTCAGGGAGGTGTGGGATGAAGGAACTGTAGTTACCCGCATGGAATTGGACCCTGATGCATCTGATCCTGGGATCGGATGA 534 0.4157 MSNTKNEQSLATVNMLRDRVSKATLGAVADLGKNGVLFGDKISDIPFRRQGVLAGRIFLLQLSLGCLTLPDGCAYDGMWRYGKRSGLGFFYFNNAERYQGSWRDDMMHGKGWLYFQSGDRCLQTFGDIFFGHFKDGWQNGEFLHVSVDGTRFREVWDEGTVVTRMELDPDASDPGIG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03628 177 SMART morn 73 94 IPR003409 -
Trre16g03628 177 SMART morn 96 117 IPR003409 -
Trre16g03628 177 Pfam MORN repeat 98 120 IPR003409 -
Trre16g03628 177 Pfam MORN repeat 75 94 IPR003409 -
Trre16g03628 177 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 65 160 - -
Trre16g03628 177 Gene3D - 74 171 - -
Trre16g03628 177 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 65 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03628 65 168 PP2C-type Phosphatase Gene Family AT1G75010 51.261 8.63e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03628 - - sspl:121759447 162.54