Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03624 ATGACACCATTCTTCAATTACACTCTCATCACTATTATCTCCCTTTTAACACTAAAATTTCTATTAATCACAACAAAAAAACTCAAAAATCTTCCACCAGGTCCATTAAGTATTCCTATAATTGGCAACATTCATCAACTCAAACACCCACTTCACCATACTCTCTACAATCTCTCACAAAAATACGGTCAAGTATTTTCCCTACGGTTCGGTTCTCGTTTAGTCGTCGTTGTTTCATCACCTTCAACCGTTCACGAATGTTTCACGAAAAACGACACCATTTTAGCAAACCGTCCACCTCTTCTCGCTGGCAAACACATTGGCTACAATTACACGGCCGTTACGGTAGCACCTTACGGTGATCATTGGCGTAACGTCCGTCGTATAATCTCCCTCGATGTTCTCTCAACACACCGTCTAAACTCCTTTTTAGGAATTAGAAAGGACGAAATTATTAGGCTCTTGCAAAGCCTAGCTCGCAGTTCTAGAGACGGTTTTGCAAAAGTGGAACTAAAATCGAAGTTTTCAGAGATGACTTTTAATACCATAATGAGAATGATATCTGGAAAGAGGTATTATGGAGAGGATTGTGATGTGCGTGACGAGGAAGGAGCGAAGGAATTTAGGGAACTGATTACGGAGATGATATCGTTGGGTGGATCGAGTAATCCCGGTGAATTTGTTGGAATTTTTAGGTGGTTTGATTATGGTGATTATGAAAAGAAGTTGAAAAGGATTAGTAGAAGATTTGATGGATTTTTGCAGGGACTTATTGATGAGCATAGAAGAAAAAAGAAGAATGTGAATACCATGATTGATCATCTCTTGAACTTGCAAGAATCACAACCGGAGTATTATACAGATCAAATCATCAAAGGAATTGTTCTGGTTATGATCCTTGGAGGAACAGAAACTTCAGCTACGACTTTAGAATGGGCAATGTCTGCTTTACTAAATCATCCGGAAGTATTAAAGAAGGCTAGAGATGAAATAGATACCAACATAGGACATGATCGCTTAGTAGAAGAGTCGGACATTACAAAACTTCCTTACATTCAAAATATAATACACGAGACATTTCGGTTATATCCTGCATTCGCATTGTTGGCGCCACATTTTTCTTCACAAGATTGCACCATAGGAGGTTACAATGTCCCAAAAGGCACTATTTTGTTGGTAAATGCTTGGGCAATTCATAGAGATTCTCAACTATGGAGTGACCCTACACAATTCAAGCCAGAGAGATTTGATAAAGAAGGAGAAGCTGAAAAGTTGATTCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGAGCAAACCTAGGACAACGTACAGTTGGTTTAACTTTGGCCTTATTTATCCAATGTTTTGATTGGAAAAGAATAAGTGAGAAAGAAATAGATATGAGGGAAGGAAAAGGAGCCACTACACCAAAGCTAATTCCCTTAGAGGCCATGTGCAGAGCTCGCTCAAATGTCACCGATAAGGTTTTCCTAAAAGCCGATTGTAGCGGGCTGGAAAATCACTTCCGTTTTTCATATAATGAAGTCGCCATCGACGTTTATTTATCCCGTGGGGGGAAAGGAAAATATCGCGAAAACCTTGGTTTAGGTTCGGGAGTTGGTTATGCGAGAGGAAGGTGTTAG 1644 0.3978 MTPFFNYTLITIISLLTLKFLLITTKKLKNLPPGPLSIPIIGNIHQLKHPLHHTLYNLSQKYGQVFSLRFGSRLVVVVSSPSTVHECFTKNDTILANRPPLLAGKHIGYNYTAVTVAPYGDHWRNVRRIISLDVLSTHRLNSFLGIRKDEIIRLLQSLARSSRDGFAKVELKSKFSEMTFNTIMRMISGKRYYGEDCDVRDEEGAKEFRELITEMISLGGSSNPGEFVGIFRWFDYGDYEKKLKRISRRFDGFLQGLIDEHRRKKKNVNTMIDHLLNLQESQPEYYTDQIIKGIVLVMILGGTETSATTLEWAMSALLNHPEVLKKARDEIDTNIGHDRLVEESDITKLPYIQNIIHETFRLYPAFALLAPHFSSQDCTIGGYNVPKGTILLVNAWAIHRDSQLWSDPTQFKPERFDKEGEAEKLIPFGLGRRACPGANLGQRTVGLTLALFIQCFDWKRISEKEIDMREGKGATTPKLIPLEAMCRARSNVTDKVFLKADCSGLENHFRFSYNEVAIDVYLSRGGKGKYRENLGLGSGVGYARGRC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03624 547 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 PANTHER CYTOCHROME P450 82C3-RELATED 13 490 - -
Trre16g03624 547 FunFam Cytochrome P450 family protein 23 492 - -
Trre16g03624 547 SUPERFAMILY Cytochrome P450 32 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Trre16g03624 547 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 Pfam Cytochrome P450 32 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03624 547 CDD CYP81 63 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03624 Trre-Chr16 40326903 40328799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03624 15 497 Cytochrome P450 AT4G37370 56.790 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03624 K13260 - gmx:100811727 701.434