Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03589 ATGAGAAGAAATGGACTGATGGAAGTGTTCCTCTTGATTCAGTGTCTGCTAATCTTTCAAAGCTTGGAAAGAGCTTATGATCGAGCTGCGATCAAGTTTCATGGAGTTGATGCGGATATAAATTTCAATGTTAGTGATTATGATGAAGATATAAAGCAGGTTTGTCCTTTTAACTTTATTAAACCAAGGGAGCTTTGCGCCTACATTGCAACTAAATCCATACAGCTAGATGCTGCCAGAGCTTATGATAAGGCTGCTATAAATTTTGAGGCCAGTACTTATGAAGGAGAGTTAATTTCTCAATGTGATAATGAAGGGTGCTGA 324 0.3796 MRRNGLMEVFLLIQCLLIFQSLERAYDRAAIKFHGVDADINFNVSDYDEDIKQVCPFNFIKPRELCAYIATKSIQLDAARAYDKAAINFEASTYEGELISQCDNEGC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03589 107 Gene3D AP2/ERF domain 22 45 IPR036955 GO:0003700|GO:0006355
Trre16g03589 107 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03589 Trre-Chr16 40066317 40068418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03589 31 98 AP2-EREBP Transcription Factor Family AT4G36920 33.333 2.20e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03589 K09284 - gmx:100797238 84.7297