Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03552 ATGGCTGTAGAAGATTTAAGTAGTGCTATTGTTTTGAATGTGAGAGAGTTTGATCCAAATAAAGATAAAGAGAGTGTTGAAGCCGTTGAAAAAATATGTGAAGTTGGTCCCACTGGAAAACTTTCTCTCTTCACTGACTTGCACGGCGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTAGCAGAGATAGACAATGAGATAGTTGGAATGATAAGAGGCTGCATCAAAACCGTTACATGCGGCAAAAAATTATCAAGACCAACAAAAAACAAAAATGAACCAAATTCCAATCATGTCCCTGTCTTCACAAAACTAGCCTACATACTAGGTCTTCGAGTTTCACCAAATCATAGAAGAATGAGAATAGGTTTAAAACTTGTTCAAAAATTGGAACAATGGTTCAGAGAAAATGGTGCTGAGTATTCATACATGGCAACCGAAAACGACAACGTTGCATCCGTTAATCTTTTCACAGCCAAATGCGGTTACTCTAAATTCCGTACACCGTCAATCCTCGTTAACCCTGTTTTCGCTCACCCTGTCAAAACGTCGTCGTCTAAAGTAACCATCATTAAGCTTAACCCAAACGACGCCGAATTGATTTACCGTAACAAATTCTCCACAACTGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACTCTCGGAACATTTCTCGCTGTTCCAAAAAATGGGCCTGGATTTCAGCCCAATAACTGGAACTGGTCCGGCCCAGAATCTTTTTTAATGGACCCACCGAGTTCTTGGGCTTTAATTAGTGTTTGGAACTGTAAAGATTTGTTTACTCTGGAAGTAAAAGGCGCGTCACGCGTGAGACGGTTATTGGCTAAAACAACGCGTGTGATAGATAAAACTTTTCCTTGGTTACGGTTACCGTCGATTCCGAATTTTTTTGAACCGTTTGGATTTCATTTAATGTATGGAATTGGAGGGGAAGGACCGGAGGTGTTGAAGATGGTGAAAGCTTTGTGTGGTTTTGCTCATAATCTTGCTATGAAGAATGGTTGTAGTGCTGTTGCTACTGAGGTTTCGAGCTGTGATCCTCTACGGTTCGCTATTCCTCATTGGAAAGCTTTGTCCTGTGAAGAGGATTTGTGGTGTATTAAGAGATTAGGTGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCTAAACCTGAATTCTCTATTTTTGTTGATCCTAGAGAATTTTAA 1248 0.4022 MAVEDLSSAIVLNVREFDPNKDKESVEAVEKICEVGPTGKLSLFTDLHGDPICRVRNSPTFLMLVAEIDNEIVGMIRGCIKTVTCGKKLSRPTKNKNEPNSNHVPVFTKLAYILGLRVSPNHRRMRIGLKLVQKLEQWFRENGAEYSYMATENDNVASVNLFTAKCGYSKFRTPSILVNPVFAHPVKTSSSKVTIIKLNPNDAELIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPKNGPGFQPNNWNWSGPESFLMDPPSSWALISVWNCKDLFTLEVKGASRVRRLLAKTTRVIDKTFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEVLKMVKALCGFAHNLAMKNGCSAVATEVSSCDPLRFAIPHWKALSCEEDLWCIKRLGEDYSDGSVGDWTKSKPEFSIFVDPREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03552 415 Gene3D - 44 174 - -
Trre16g03552 415 Pfam Acetyltransferase (GNAT) family 60 168 IPR000182 GO:0016747
Trre16g03552 415 FunFam Probable N-acetyltransferase HLS1-like 21 175 - -
Trre16g03552 415 CDD NAT_SF 63 146 - -
Trre16g03552 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 187 IPR000182 GO:0016747
Trre16g03552 415 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 415 - -
Trre16g03552 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 58 173 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03552 Trre-Chr16 39033910 39035370 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre16g03552 Acetyltransf_1 1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03552 - - gmx:100775317 642.114