Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre16g03540 | ATGTCTCAAGGAATGCAGAATGCAGAACAGGCCCTTCTCTCCGGATGCTCCGCAGGTGGTCTAGCATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTACCAAAACCTTCCAAAGTGAAGTGTATTAGTGATGCAGGATTTTTTCTCGAAATTGATGTATCTGGAGGACGGTCACTGAGGGATCTGTTTGGAGGCGTTGTTCAGTTACAGGAAGTTTACAAAAATCTGCCGAAAAATTGTATAAGCCGACTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGGTAGAACATGTGGAGACACCACTGTTTCTACTCAACGCGGCTTATGATGTTGTGGCAGCTGAACATTGTTTGATAGGCAGCTTAGTTAACAAAATTTGA | 387 | 0.4315 | MSQGMQNAEQALLSGCSAGGLASIIHCDEFQSLLPKPSKVKCISDAGFFLEIDVSGGRSLRDLFGGVVQLQEVYKNLPKNCISRLDPTSCFFPQNLVEHVETPLFLLNAAYDVVAAEHCLIGSLVNKI | 128 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre16g03540 | 128 | PANTHER | NOTUM-RELATED | 1 | 121 | IPR004963 | GO:0016787 | |
Trre16g03540 | 128 | Pfam | Pectinacetylesterase | 1 | 125 | IPR004963 | GO:0016787 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre16g03540 | Trre-Chr16 | 38565833 | 38566967 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre16g03540 | 1 | 112 | Carbohydrate Esterase | AT1G57590 | 67.257 | 3.89e-53 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre16g03540 | K19882 | - | gmx:100786972 | 196.438 |