Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03539 ATGATGGGTAGATTATGGATCATGTATAGATGCAAGAAGGGAGGAGGATGGTGTAACACTCTCAGAAACTGTGTCTACAGAAAAAAGACTCCTCGTGGTTCCTCAATATACATGGAAAATCGAATACCATTCACAGGAATATTGAGCAATAAACCCGAAGAAAACCCTAATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTATGATGGAGCGTCTTTTAGTGGAGATAGTGAAAACAAGGCTGTGGGGCTTCAATTCCGTGGACAAAGAATATGA 279 0.3907 MMGRLWIMYRCKKGGGWCNTLRNCVYRKKTPRGSSIYMENRIPFTGILSNKPEENPNFFNWNRVKLRYYDGASFSGDSENKAVGLQFRGQRI 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03539 92 PANTHER NOTUM-RELATED 13 92 IPR004963 GO:0016787
Trre16g03539 92 Pfam Pectinacetylesterase 13 92 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03539 Trre-Chr16 38565064 38565811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03539 13 92 Carbohydrate Esterase AT1G57590 75.000 9.11e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03539 K19882 - gmx:100786972 147.517