Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03533 ATGCTTTCTTATTTGGTGCATCTCTGCCATACATATATCGATTCAAATTTAAAATCAAGTGAATCTTGGCTTAATGATGAAGGGTTGAGCTCACAACCTAACAAATGGAAAGGCACTTGTCTAGCTATTTGTTTCACCTACAATAATAAATTAATTGGAGCGAGATATCATAAAAATTCTCCAAGAGACACAAGTGGGCACGAAATCCATACAACATCAACGGCGGCCAGCAACCCAATTAGCATGGCAAATATGTTAGGCCTGGGCCAAGGAACAATAAGAGGTAGAGCTTCATCAGCACAGATTTCCACTTATAAAGTATGTTGGTCTGATGGATGTGATGATATCGACATGGTCACTGCATTTGATGATGCCATTGCAGATGGGGTTGACATAATATCGGTTTCAATTGGAGGAAAACTAAATAAAATATATATTTCAAGATGGAATATCCATTGGAGCATTCCATGCAATGCAAAATGGGGTACTAACTGCAGTTACGGGAGGAAATTCGGGTCTAGATAG 525 0.3886 MLSYLVHLCHTYIDSNLKSSESWLNDEGLSSQPNKWKGTCLAICFTYNNKLIGARYHKNSPRDTSGHEIHTTSTAASNPISMANMLGLGQGTIRGRASSAQISTYKVCWSDGCDDIDMVTAFDDAIADGVDIISVSIGGKLNKIYISRWNIHWSIPCNAKWGTNCSYGRKFGSR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03533 174 Pfam Subtilase family 47 142 IPR000209 GO:0006508|GO:0008236
Trre16g03533 174 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 141 IPR045051 -
Trre16g03533 174 Gene3D Peptidase S8/S53 domain 13 143 IPR036852 GO:0004252|GO:0006508
Trre16g03533 174 SUPERFAMILY Subtilisin-like 46 151 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03533 Trre-Chr16 38517734 38518895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03533 13 137 Subtilisin-like Serine Gene Family AT5G59190 51.163 3.13e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03533 - - gmx:100784447 168.703