Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03322 ATGACTGGAGGTGAAACAGATCAAGTGAATATAGAGGAAGAGACAGAGATAACAAAGGAGATTTCAGAGAAGAAGCTGAAAGATAGAAAGGTGTCATGGGCAAAACTACGTCGTGTAGACTCTCTCAACTTGGAAGCTGGAAGAGTTTCTATGAATGCAAACCACCATTCCAAGATGGGTTGGAGCATGACATTGAGTTTGGCATTTCAAAGCATAGGGATTGTATACGGTGATATTGGTACATCACCACTTTATGTGTATGCTAGTACTTTCACAGATGGAATTAAACACAACGATGACATTCTTGGAGTATTGTCTCTCATCATCTATACCATTGTGCTCATTCCCATGCTCAAATATGTTTTCATTGTCTTATGGGCTAATGACAATGGCAATGGTGGAGCATTTGCACTATACTCATTGATATGTAGACATATAAAGGTGAGTTTGGCTCCCAATCAACAGCCAGAGGACATGGAACTTTCTAATTACAAACTTGAAATACCATCTAGCCAGCAGAAAAGAGCTTATAAACTAAAGCATAAGATTGAGAATAGTCATTTTGCAAGAATTCTACTTTTACTTCTAGCTATAATGGGCACTGCCATGGTCATTGGAGATGGGATTCTCACTCCATCAATTTCAGTCCTTTCTGCGGTGAGCGGGATCAGTTCATCACTAGGTCAAGATGCTGTCGTAGGCATCACTGTTGCAATTTTGATCGTCCTATTTAGCATGCAACGATTTGGTACCGATAAAGTGGGATCCTTATTTGCTCCAATTATTTTAGTATGGTTTACATTTATTGGTGGAATTGGTCTCTACAATTTATTCAAACATGACATTGGAGTATTACGAGCTTTTAATCCAAAATATATAGTTGATTACTTCAAAAGAAATGGCAAGGAAGGATGGCTATCACTAGGTGGAGTCTTTTTATGCATAACAGGATCTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTGCGAGCCATTCAAATTAGCTTTTCTTTTGTTACATTCCCTGCAATCTTGGCAGCATATATTGGACAAGCAGCATTTCTAAGAAAATTTCCTGACAAAGTGGGAAATACTTTCTATGACAGTATACCAGACCCCTTGTATTGGCCAACATTTGTTGTGGCTATTGGTGCTGCCATTATAGCTAGTCAAGCTATGATTTCAGGAGCATTTTCCATCATATCACAAGCTTTAAGTCTAGGTTGTTTCCCTAGAGTCAGGGTTGTGCATACTTCAACTAAGCATCAAGGTCAAGTGTACATTCCAGAGATCAACTACATGTTCATGTTTGGATGTATTATAGTTTGTGTTGCCTTCAAGACCACAGAAAAAATCAGTCATGCATATGGTATTGCAGTTATTGGTGATATGATGATAACAACAATGCTAGTTTCACTTATAATGCTTGTTATATGGAAGAAGAGTTTATGGATGGTTATCATTTTCTTTTTGGTATTTGGTAGCACAGAGTTTCTTTATTTATCATCTCAAATAACCAAGTTTACAGGAGGAGGATATTTTCCAATTGTACTAGCTACAATCTTGACAATGGTTATGGGAATTTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTCAAGAACAAAGTTTCAACTGAGTATTTGAAGCAATTGGCCAACAACACTGATGTTCATAGAGTGCCTGGAATTGGACTTTTGTATTCCGAACTTGTACAAGGAATTCCGCCGATATTTCCACATTTTATAGCCAGTGTACCATCTATTCATTCGGTTGTCATATTTGTTTCCATTAAGACAATTCCGGTTAGTAGAGTTGCATTGGAAGAAAGGTTTTTGTTTCGGCAAGTTGAACCGAGGGAGTATAGAATATTTCGATGTGTTGCAAGGCGTGGTTACAATGATGTGCTTGGAGATCCTGTGGAGTTTGAGTCACAATTAATAGAAAATCTCAAAGGATTCATTCAACAAGAGAATTTCATGCTTGAAGCTAATGATGGTACTAATACTAATAATATAACATTACCACCAAGTGAACAATTAGTGGTACCAATTCCGACTAACGAGAGTGATCAAATGGAAGATGATTCTTCAGCTACAGAATTGAAACCAAGGTTTAATAATTCTTCAAATAGAATCATCCCAAGTATTGGTGTTTCTCATGTATCATTAGATTCCATTAGATCATTACCTGGAAGTGTGACCAAATCATCAAATTTCTATGCACCTATCTTCCAAGGACCTGAAGAGGAAATTAAGTTTATAGATAAAGCAATGGAAAAAGGTGTGGTGTATATGATAGGTGAAGCAGAGGTAGTAGCTAGTCCAAATTCTTCTATCTTGAATAAGATTGTTGTCAACTATGCTTATAGTTTCTTGAGGAAGAATTTTAGACAGGCAGAACAATCCATAGCTATTCCACACAGGAGACTTCTCAAGGTTGGAATGACATATGAATTATAA 2469 0.3718 MTGGETDQVNIEEETEITKEISEKKLKDRKVSWAKLRRVDSLNLEAGRVSMNANHHSKMGWSMTLSLAFQSIGIVYGDIGTSPLYVYASTFTDGIKHNDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHIKVSLAPNQQPEDMELSNYKLEIPSSQQKRAYKLKHKIENSHFARILLLLLAIMGTAMVIGDGILTPSISVLSAVSGISSSLGQDAVVGITVAILIVLFSMQRFGTDKVGSLFAPIILVWFTFIGGIGLYNLFKHDIGVLRAFNPKYIVDYFKRNGKEGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFVTFPAILAAYIGQAAFLRKFPDKVGNTFYDSIPDPLYWPTFVVAIGAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSTKHQGQVYIPEINYMFMFGCIIVCVAFKTTEKISHAYGIAVIGDMMITTMLVSLIMLVIWKKSLWMVIIFFLVFGSTEFLYLSSQITKFTGGGYFPIVLATILTMVMGIWHYVHKERYMFELKNKVSTEYLKQLANNTDVHRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVIFVSIKTIPVSRVALEERFLFRQVEPREYRIFRCVARRGYNDVLGDPVEFESQLIENLKGFIQQENFMLEANDGTNTNNITLPPSEQLVVPIPTNESDQMEDDSSATELKPRFNNSSNRIIPSIGVSHVSLDSIRSLPGSVTKSSNFYAPIFQGPEEEIKFIDKAMEKGVVYMIGEAEVVASPNSSILNKIVVNYAYSFLRKNFRQAEQSIAIPHRRLLKVGMTYEL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03322 822 Pfam K+ potassium transporter 68 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre16g03322 822 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 58 821 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre16g03322 822 NCBIfam potassium uptake protein 67 821 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03322 Trre-Chr16 30244356 30252117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03322 4 822 Inorganic Solute Cotransporters AT4G13420 57.959 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03322 K03549 - gmx:100814313 1214.91