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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre16g03264
ATGATGATGGTTGAAAAAGAAGACTTGGGTTTGAGTCTAAGCTTGAACTTCTTTCAAAATACCCCAAAGCAATCTCAACCTCTCAATCTAATGTCCTCTTCTCCTTCTCCTTATTTCCATTCTCAACAAATTATCACTCCATCAGATCGAAACTTGAAACTTGGGATTGATGTGAATCGATTGCCATGTACCGTGGTTGACTGCGAAGAAGAAGAAGAAGAAGCAGGGGTTTCATCTCCAAACAGTACGGTTTCGAGTGTAAGTGGAAAACGAAGCTCAAGAGAATTAGATAATGACGTGGACAATAGAGGGAATATCAGTGATGAAGAAGACGCTGAAACCGCTAGAAAAAAACTCAGACTCTCTAAAGATCAATCACTTATTCTAGAAGAAACATTCAAAGAACACAATACCCTTAATCCCAAACAAAAATTAGCACTTGCAAAACAACTTGGCCTTACTCCAAGACAAGTTGAAGTCTGGTTCCAAAACAGACGAGCCAGGACAAAGCTAAAGCAAACGGAGGTTGATTGTGAGGTGTTGAAAAGGTGTTGTGAAAATCTAACGGAGGAAAATGGGAGACTACAGAAGGAAGTTCAAGAGCTAAGAGCACTGAAACTTTCTCCTCAATTTTACATGCAAATGACACCACCCACTACTCTTACTATGTGCCCATCTTGTGAACGTGTGGCTGTTCCATCTTCCGGTGTGGATGCATCCAACCGTAACATTTCTATGGCCCAAGCCCATCCTCGGGTTGTACCCATAGGCCCGTGGGCTTCTGTAGCTCCCATCACGCAGCATAGGATGTTTGATGTTTTCCGTCAATGA
831
0.4224
MMMVEKEDLGLSLSLNFFQNTPKQSQPLNLMSSSPSPYFHSQQIITPSDRNLKLGIDVNRLPCTVVDCEEEEEEAGVSSPNSTVSSVSGKRSSRELDNDVDNRGNISDEEDAETARKKLRLSKDQSLILEETFKEHNTLNPKQKLALAKQLGLTPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENGRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSSGVDASNRNISMAQAHPRVVPIGPWASVAPITQHRMFDVFRQ
276
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre16g03264
276
MobiDBLite
consensus disorder prediction
71
113
-
-
Trre16g03264
276
SUPERFAMILY
Homeodomain-like
108
173
IPR009057
-
Trre16g03264
276
MobiDBLite
consensus disorder prediction
77
91
-
-
Trre16g03264
276
ProSitePatterns
'Homeobox' domain signature.
147
170
IPR017970
GO:0000981|GO:0006355
Trre16g03264
276
ProSiteProfiles
'Homeobox' domain profile.
112
172
IPR001356
GO:0003677
Trre16g03264
276
SMART
HOX_1
114
176
IPR001356
GO:0003677
Trre16g03264
276
Pfam
Homeodomain
116
170
IPR001356
GO:0003677
Trre16g03264
276
SMART
halz
172
215
IPR003106
GO:0006355|GO:0043565
Trre16g03264
276
PRINTS
Lambda-repressor HTH signature
143
152
IPR000047
GO:0003677
Trre16g03264
276
PRINTS
Lambda-repressor HTH signature
152
168
IPR000047
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre16g03264
Trre-Chr16
29303104
29304684
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre16g03264
2
275
Homeobox Transcription Factor Family
AT4G17460
59.000
6.19e-97
284
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Trre16g03264
HD-ZIP_N
5.1e-21
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre16g03264
K09338
-
gmx:100813367
340.887
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