Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03163 ATGGCTAGTGGATGGATGAAGTCATTACAATGCAAATCAAGAGCATTTGAAGATGTTTATAATCCATATCCCAAAATCCTCTTACCAAGTGCCAGTTGCAGAAAAACCGTTCAAAACATCAAAGACATTGTTGATATTCCAAAACCCAAACCCAAAAAACCAAAAACATCCTTAAAAAATAAACATTCTAGTTCAAAATCAATATCAGAATCAGAATCACCCACCATGAACCACCGTTCACGAACCACAACAACCACTTTATCATCATCTTCACGTGCAATCACTGAACTACCAGAAGGACACCCATCACGAAACGTGGTGGATATAATTTTTCATACTAGTTGGGGCAATAAGGAGTGTCCGGGTCGGGTTGAAATGGTGTTTAAGGTGCAAAACGGAGCACGAACCATGTCACGGTTTGAAGAGTTTCGTGAAGCGGTGAAAGCACGCGCCGATGATTCTGTGGCGGATTCTGAGGGGAAGAATTGGGAGGAGAATGCTAGGTGTGTTGCTGATGGAAATGAAGTGATGCAGTTTCATTGTTTGGGTCCTGCTGAAGATGGTGGTTCACACGGTGCTTGGTCTTTTCCAGAGCGTAAAGGGTCGGCGATTTGTACGTTTTCCGGCAGCGGTAACGCACATGAGTATGGCGGCGGAGGGAAGGGTAGACAGGCAATGTTGGTTTGCCGGGTTGTGTCGGGTCGGGTTTCGAAACAACTCGGGTTTTTGGATTCTTTGTTGGATAAGCGAGTTGGGTTCGACTCAGTGAGTGGGGACAATGGCGAGTTGTTAGTTTTTGACTCGTGTGCGGTATTGCCATGTTTTCTTATTATTTACAGCTTGTAA 846 0.4456 MASGWMKSLQCKSRAFEDVYNPYPKILLPSASCRKTVQNIKDIVDIPKPKPKKPKTSLKNKHSSSKSISESESPTMNHRSRTTTTTLSSSSRAITELPEGHPSRNVVDIIFHTSWGNKECPGRVEMVFKVQNGARTMSRFEEFREAVKARADDSVADSEGKNWEENARCVADGNEVMQFHCLGPAEDGGSHGAWSFPERKGSAICTFSGSGNAHEYGGGGKGRQAMLVCRVVSGRVSKQLGFLDSLLDKRVGFDSVSGDNGELLVFDSCAVLPCFLIIYSL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03163 281 MobiDBLite consensus disorder prediction 44 99 - -
Trre16g03163 281 MobiDBLite consensus disorder prediction 61 96 - -
Trre16g03163 281 SUPERFAMILY ADP-ribosylation 94 280 - -
Trre16g03163 281 Gene3D - 92 280 - -
Trre16g03163 281 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03163 Trre-Chr16 27913334 27914179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03163 93 281 C2H2 Transcription Factor Family AT2G29660 35.088 6.61e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03163 - - mtr:25493617 404.06