Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03143 ATGATGGGAAGTGAAGAAAGAGAGAAAGTAGTGACGAAGAAGATCCAAGACTTAGAAGAAGAACATGCTTTCATGAAACAAGAAATGTCAAAGCTTAAGGTTAATGATGGTAAAGAACAACAACAACATCGTCAAAGGTCTCACTCTGTGTCTCCTCAACGTTCTAGATTAGGTTCATGGAACAAAGGTTCTTGTTCTTTCAAACACTCTTCACCTCTCAGAAAGGAAACTCATGCTCATACTCATACACTCGTCAATTTCACTGAAAAACATTATCTCAATATTTTGCACTCTTTATAG 300 0.3667 MMGSEEREKVVTKKIQDLEEEHAFMKQEMSKLKVNDGKEQQQHRQRSHSVSPQRSRLGSWNKGSCSFKHSSPLRKETHAHTHTLVNFTEKHYLNILHSL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03143 99 MobiDBLite consensus disorder prediction 21 45 - -
Trre16g03143 99 MobiDBLite consensus disorder prediction 46 68 - -
Trre16g03143 99 MobiDBLite consensus disorder prediction 21 75 - -
Trre16g03143 99 Coils Coil 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03143 Trre-Chr16 27684015 27684314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03143 11 99 MAP Kinase Kinase Kinase AT3G06620 42.202 9.89e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03143 - - gmx:100785569 90.5077