Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03139 ATGGCAGATGAGGTGGTCCTGTTGAATTTCTGGCCAAGTCCTTATGGCATGAGGGTCCTAATTGCACTAGAGGAAAAGGGTATTAAATATGAGAACAGAGAAGAAGATTTCAGCAATAAGAGCCTTTTACTACTACAAATGAACCCAGTTCATAAGAAAATACCAACTTTAATTCATAATGGTAAATCCATTTGTGAGTCACTAAATATTGTTGAATATATTGATGAGGTTTGGAATGATCATTCTCCTTTGTTTCCTTCTGATCCTTACCAAAGTGCCCAAGCTAAATTTTGGGCTAACTACATTGACACTAAGATATATGATATTGGATTGAAGTATTCAAAATCTGAAGGAGAGGCTAAAGAAGCTGCAAAAAAAGAATTTCTTGAGGGTGTTAAAGTGTTGGAAGAACAACTGGGTAACAAACCTTATTTTGGAGGAGACAACTTTGGGTTTGTGGATGTGGCACTTGTTCCATTGTTTTGCATGTTCTATACCTATACATTTGCTGGAAAATTAATTGATGATGAAAAATATCCTAATATCACTTCTTGGGCTAAAAGGTGTCTTAAAAAAGAGAGTGTGTCTAAGTCTATTCCTAATGAGGACAAGGTAAAACGTTTTCTAGTGGAGAATGGACTCTCAAATGGTGGACATTAG 660 0.3591 MADEVVLLNFWPSPYGMRVLIALEEKGIKYENREEDFSNKSLLLLQMNPVHKKIPTLIHNGKSICESLNIVEYIDEVWNDHSPLFPSDPYQSAQAKFWANYIDTKIYDIGLKYSKSEGEAKEAAKKEFLEGVKVLEEQLGNKPYFGGDNFGFVDVALVPLFCMFYTYTFAGKLIDDEKYPNITSWAKRCLKKESVSKSIPNEDKVKRFLVENGLSNGGH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03139 219 Gene3D - 88 213 - -
Trre16g03139 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Trre16g03139 219 FunFam Tau class glutathione S-transferase 1 87 - -
Trre16g03139 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Trre16g03139 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Trre16g03139 219 Gene3D Glutaredoxin 1 87 - -
Trre16g03139 219 SUPERFAMILY GST C-terminal domain-like 76 209 IPR036282 -
Trre16g03139 219 CDD GST_N_Tau 5 78 - -
Trre16g03139 219 Pfam Glutathione S-transferase, C-terminal domain 115 191 IPR004046 -
Trre16g03139 219 CDD GST_C_Tau 89 205 IPR045074 GO:0004364|GO:0006749
Trre16g03139 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Trre16g03139 219 SFLD Glutathione Transferase (cytosolic) 2 210 IPR040079 -
Trre16g03139 219 SFLD Main.3: Omega- and Tau-like 2 210 IPR045073 -
Trre16g03139 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03139 Trre-Chr16 27607677 27608854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03139 1 211 Glutathione S-transferase Gene Family AT1G78370 54.028 1.19e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03139 K00799 - gmx:100776076 299.671