Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03138 ATGATCAGAATAGCACTTGCTGAAAAGGGTATCAAATATGAATACAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTGTTGTTACAAATGAACCTTGTTCATAAGAAAATCCCTGTTCTTATTCACAATGGTAAACCCATTGCTGAATCTCTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAAATCTTCTCTTTTACCTTCTGATCCTTATCAGAAATCACAAGCTAGATTCTGGGCTGATTATGTTGACAAAAAGATATTTGAAGTTGGAAGGAAGCTTTTGGCCAAAAAAGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGAAGCCATCAAATTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGACAAGCTTGGTTATGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAGACTTTTGGCAACATCAATGTAGAGAAGGAAAGCCCTAAGTTCATTGCTTGGGCCAAGAGATGCGTCAAGATTGAAAGTGTCTCCAAGTCTCTTCCTGATCAGGATAAGCTATATGGATTCATTGTAGAGTTCAGGAAGATGATAAGCATTGAATAG 609 0.376 MIRIALAEKGIKYEYKEEDLRNKSPLLLQMNLVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDKSSLLPSDPYQKSQARFWADYVDKKIFEVGRKLLAKKGEEQEAAKKEFIEAIKLLEQELGDKTYFGGDKLGYVDVALIPFYTWFKGYETFGNINVEKESPKFIAWAKRCVKIESVSKSLPDQDKLYGFIVEFRKMISIE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03138 202 Coils Coil 101 121 - -
Trre16g03138 202 SFLD Glutathione Transferase (cytosolic) 2 200 IPR040079 -
Trre16g03138 202 FunFam Glutathione S-transferase U20 71 202 - -
Trre16g03138 202 Pfam Glutathione S-transferase, C-terminal domain 105 171 - -
Trre16g03138 202 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 71 199 IPR010987 -
Trre16g03138 202 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 189 IPR045073 -
Trre16g03138 202 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 65 IPR004045 -
Trre16g03138 202 SUPERFAMILY Thioredoxin-like 2 64 IPR036249 -
Trre16g03138 202 Gene3D - 71 202 - -
Trre16g03138 202 CDD GST_C_Tau 72 195 IPR045074 GO:0004364|GO:0006749
Trre16g03138 202 CDD GST_N_Tau 1 61 - -
Trre16g03138 202 Pfam Glutathione S-transferase, N-terminal domain 2 59 IPR004045 -
Trre16g03138 202 Gene3D Glutaredoxin 1 70 - -
Trre16g03138 202 SFLD Main.3: Omega- and Tau-like 2 200 IPR045073 -
Trre16g03138 202 SUPERFAMILY GST C-terminal domain-like 59 199 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03138 Trre-Chr16 27585589 27586525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03138 3 197 Glutathione S-transferase Gene Family AT1G78380 66.667 3.52e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03138 K00799 - gmx:547520 335.88