Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03135 ATGAGAATCAGAATAGCACTTGCTGAAAAGGGTATCAAATATGAATACAAAGAAGAAGACTTAAGGAACAAAAGCCCTTTGTTGTTACAAATGAACCCTGTTCATAAGAAAATCCCTGTTCTTATTCACAATGGTAAACCCATTGCTGAATCTCTAATTGCTGTTCAGTATATTGATGAAGTTTGGAATGATAAATCTTCTCTGTTACCTTCTGATCCTTTTCAGAGATCACAAGCTAGATTCTGGGCTGATTATGTTGACAAAAAGATATATGAAGTTGGAAGGAACCTTTGGACCAAAAAGGGAGAAGAGCAAGAAGCTGCCAAGAAGGAATTCATAGAAGCAATCAAATTGTTGGAGCAAGAGTTGGGAGACAAGACTTATTTTGGAGGAGACAAGCTTGGTTATGTGGATGTAGCACTCATTCCATTCTACACTTGGTTTAAAGGCTATGAGACTTTTGGAAACATCAATGTAGAGAAGGAAAGCCCCAAGTTCATTGCTTGGGCCAAGAGATGCATCAAGATTGAGAGTGTCTCCAAGTCTCTTCCTGATCAGGATAAGGTCTATGACTTCATTGTGCAGATCAGGAAGAAGATGGGTATTGAGTAG 612 0.3873 MRIRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDKSSLLPSDPFQRSQARFWADYVDKKIYEVGRNLWTKKGEEQEAAKKEFIEAIKLLEQELGDKTYFGGDKLGYVDVALIPFYTWFKGYETFGNINVEKESPKFIAWAKRCIKIESVSKSLPDQDKVYDFIVQIRKKMGIE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03135 203 CDD GST_N_Tau 1 62 - -
Trre16g03135 203 SFLD Main.3: Omega- and Tau-like 1 201 IPR045073 -
Trre16g03135 203 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 191 IPR045073 -
Trre16g03135 203 Pfam Glutathione S-transferase, N-terminal domain 1 60 IPR004045 -
Trre16g03135 203 FunFam Tau class glutathione S-transferase 1 71 - -
Trre16g03135 203 FunFam Glutathione S-transferase U20 72 203 - -
Trre16g03135 203 SUPERFAMILY Thioredoxin-like 1 90 IPR036249 -
Trre16g03135 203 SFLD Glutathione Transferase (cytosolic) 1 201 IPR040079 -
Trre16g03135 203 SUPERFAMILY GST C-terminal domain-like 60 200 IPR036282 -
Trre16g03135 203 Gene3D Glutaredoxin 1 71 - -
Trre16g03135 203 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 72 200 IPR010987 -
Trre16g03135 203 Coils Coil 102 122 - -
Trre16g03135 203 Gene3D - 72 203 - -
Trre16g03135 203 Pfam Glutathione S-transferase, C-terminal domain 106 172 - -
Trre16g03135 203 CDD GST_C_Tau 73 196 IPR045074 GO:0004364|GO:0006749
Trre16g03135 203 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 66 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03135 Trre-Chr16 27555705 27557065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03135 1 200 Glutathione S-transferase Gene Family AT1G78380 67.000 2.17e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03135 K00799 - gmx:547520 360.918