Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03134 ATGGCAGATGAAGTGATTCTGCTAGATTTTTGGGCTAGTCCTTTTGGAATGAGAGTGAGAACAACCCTTGCTGAAAAGGGTATAAAGTATGAATACATAGAGGAAGACTTGATGTCTATGAACAAAAGCCCTTTGCTGCTAGAAATGAACCCTGTTCATAAGAAATATATTGATGAAGTTTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTTTGGGCTGATTATGTTGACAAAAAGACATATGCAATGCCAAGGAACATTTGTGTCAAAAAGGGAGAAGAACAAGAAGTTGCAAAAAAGGAATTCATAGAAACTCTCAAGTTGTTTGGGGGACAGTTGGGAGACAAGTCTTATTTTGGTGGAGACAACTTTGGTTTTTTGGATATATCACTCATCCCATTTTATGGTCGATTCAAAGCTGTTGAGACCTTCGGCAACCTTGATATAAAGAGTGAGTGTCCAAAGTTCATTGCTTGGGGTAAGAGATGCATGAAGATTGAAAGTGTTTCTAAGTCTCTTCCAAACGAAGATAAGATCAATGAGTTCGTTGTGGAGATGAGAAAGAACGTAGGCATTGAGTAG 609 0.3842 MADEVILLDFWASPFGMRVRTTLAEKGIKYEYIEEDLMSMNKSPLLLEMNPVHKKYIDEVWNDRSPLLPSDPYQRSQARFWADYVDKKTYAMPRNICVKKGEEQEVAKKEFIETLKLFGGQLGDKSYFGGDNFGFLDISLIPFYGRFKAVETFGNLDIKSECPKFIAWGKRCMKIESVSKSLPNEDKINEFVVEMRKNVGIE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03134 202 Pfam Glutathione S-transferase, N-terminal domain 5 54 IPR004045 -
Trre16g03134 202 Gene3D Glutaredoxin 1 55 - -
Trre16g03134 202 FunFam Glutathione S-transferase U20 71 202 - -
Trre16g03134 202 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 71 191 IPR010987 -
Trre16g03134 202 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 93 IPR004045 -
Trre16g03134 202 CDD GST_C_Tau 72 195 IPR045074 GO:0004364|GO:0006749
Trre16g03134 202 Pfam Glutathione S-transferase, C-terminal domain 107 168 - -
Trre16g03134 202 SUPERFAMILY GST C-terminal domain-like 59 198 IPR036282 -
Trre16g03134 202 Gene3D - 71 202 - -
Trre16g03134 202 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 55 IPR045073 -
Trre16g03134 202 SUPERFAMILY Thioredoxin-like 4 63 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03134 Trre-Chr16 27528759 27534865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03134 1 202 Glutathione S-transferase Gene Family AT1G17180 58.824 2.55e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03134 K00799 - gmx:547520 302.753