Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03133 ATGAACCCGGTTCACAAGAAATCCCCGGTTCTCATCCACAATGGTAAACCCATTTGTGAGTCTCTAATTGCTGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTCCTTTGTTGCCTTCTGATCCTTATCAGAGATCACAAGCTTTATTTTGGGCTGCCTATGTTGATAGCAAGATATATGCAATTTTTAGAAACATCTGTGTCAAAAAGGGAGAAGAACAAGAAGTTGCAAAAAAGGAATTCATTGAAACTCTCAAATTGTTGGAGGGACAGTTGGGAGACAAGTCTTATTTTGGAGGAGACAACTTTGGTTTTGTGGATATATCACTCATCCCATTCTATGGTCGATTCAATGTCGTTGAGATCTTTGGCAACATTGATATAAAGAGTGAGTGTCCTAAGCTCATTGCTTGGGGTAAGAGATGCATGAAGATTGAGAGTGTTTTCAAGTCTCTGCCAGACCAAGATAAGATCTATGAGTTCATTGTGGAGATGAGAAAGAAGTTAGGCGTTGAGTAG 522 0.3908 MNPVHKKSPVLIHNGKPICESLIAVQYIDEVWNDKSPLLPSDPYQRSQALFWAAYVDSKIYAIFRNICVKKGEEQEVAKKEFIETLKLLEGQLGDKSYFGGDNFGFVDISLIPFYGRFNVVEIFGNIDIKSECPKLIAWGKRCMKIESVFKSLPDQDKIYEFIVEMRKKLGVE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03133 173 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 162 IPR045073 -
Trre16g03133 173 Pfam Glutathione S-transferase, N-terminal domain 2 30 IPR004045 -
Trre16g03133 173 Gene3D Glutaredoxin 1 41 - -
Trre16g03133 173 SUPERFAMILY Thioredoxin-like 1 35 IPR036249 -
Trre16g03133 173 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 36 IPR004045 -
Trre16g03133 173 Gene3D - 42 173 - -
Trre16g03133 173 FunFam Glutathione S-transferase U20 42 173 - -
Trre16g03133 173 SFLD Main.3: Omega- and Tau-like 1 170 IPR045073 -
Trre16g03133 173 Pfam Glutathione S-transferase, C-terminal domain 78 139 - -
Trre16g03133 173 CDD GST_C_Tau 43 166 IPR045074 GO:0004364|GO:0006749
Trre16g03133 173 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 42 170 IPR010987 -
Trre16g03133 173 SUPERFAMILY GST C-terminal domain-like 30 170 IPR036282 -
Trre16g03133 173 SFLD Main (cytGST) 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03133 Trre-Chr16 27524216 27525509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03133 1 173 Glutathione S-transferase Gene Family AT1G17180 65.896 4.02e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03133 K00799 - gmx:547520 274.633