Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03081 ATGGCCGGAGACGTCGTCGTGAAGATTGACAACGCCGGTGAACCTTCTCGAGAGAATAAGATTTGGAGAGAGTCAAGCTATGATTTCTGGAATGATACCGGCGACAATGTCCGTGATGATAGTTTTGATTTCCGGAATAAAACTCATCAGGAGGATCCACCGTCTCAGCTAATCGGAAAGTTTTTGCATAAACAGAAAGCCTCTGGTGAGATGTCGTTGGATATGGATTTGGAGATGGAGGAGCTTCAGAATGAAGGTGATAGCGATGGAAAGTTAACGCCGGTGGAGGAATCTCCTACAATGATTCAACGTGAGCTTAAGGTTTCGTTTGAGGAACCTGCTTCGAATGTAATTGAATCGGTTAATGATCCTGTTAGGAGAAGACACAGCAAGGATTCACCTTCCATGGCTGAGTTTGCTAGACCTCCATTTCCTCCAAATCATGACCGTCGTCGTTCTCCGTCACCGGCCCCGGCCGGAACCGATTGTGAGGTCATAAGGTGTACCTCTAATGGTTCCTTTCATCCTTCTTTTGAAAGGAACCTTTCCATGCAGAGAAAATCAGCGTTATTGAAAACCAAAACTAAGTCTAGATTAATGGACCCGCCAGATGAACCTGTGGTGGATAGAAGATCGGGTCGGGTTGCTAAATCGGGTCAGCTTTTTTCCGGGTTTATTGGGAAGAAAGGTGATGAGGAGGAAGATGATCCGTTTATGGAAGAGGATTTTCCAGATGAGTATAAGAAAACACAATTTAGTCTTTGGATTCTTCTTGAATGGTTGAGTTTGATTTTGATTATTGGGGCATTAGTAACAACTTTGAGTGTTCCTTTATTGAGAGAGAAGAATTTGTGGCAACTCTTGTTATGGAAATGGGAGGTAATGATTCTTGTTCTAATATGCGGTAGATTGGTTTCTGATTGGTTTATTAGAATCGCCGTGTTTTGCATTGAAAGAAATTTTCTATTGAGAAAAAGGGTACTTTATTTTGTGTATGGTGTGAAGAAAGCTGTGCAAAATTGTGTTTGGTTGGGACTTGTTTTAATTGCATGGCATTTTCTCTTTGATGAGAGAGTTCAAAGAGAGACAAAAAGTGATTTTCTTCAATATGTCACCAAGGTTTTGGTTTGTTTCTTGGTGGGTACTTTGGTGTGGTTGTTGAAAACTTTAATGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATATTTTGATAGAATTCAAGAGTCACTGTTTAATCAATTCGTAATCGAAACACTTTCGGGGCCACCTTTGGTGGAAATTCGAAAGGCTGAAGAGGAAGAGGAAAGACTTGCTGAAGAGGTTCAAAAGTTGCAGAATGCTGGGGTTACCATACCTGCTGATCTTAGAGATTCTGCATTTCGTACCAATAGTGGAAGGTCAAAGAGTGGAATGCTTCCGAAAAGCCCTGTTGTTAAAAGTGCCAGGTTTTCAAGGCCACTATCGAAGAAATCTGATGATGGAATTGGGAATGGTGGTGGGATAACTATTGATCACTTACATAAGCTGAATCCAAATAATGTGTCTGCTTGGAATATGAAAAGGTTGATGAATATGGTTCGGCACGGGGCACTTACTACATTAGATGAACAAATACTTGATTCCACTGCTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATACCCTGAGGATTTGATGCGTTTTATGCGAGAAGATGAAGCTATAAAAACCATAACAAACATAGGATGCATAATTTGA 1812 0.4095 MAGDVVVKIDNAGEPSRENKIWRESSYDFWNDTGDNVRDDSFDFRNKTHQEDPPSQLIGKFLHKQKASGEMSLDMDLEMEELQNEGDSDGKLTPVEESPTMIQRELKVSFEEPASNVIESVNDPVRRRHSKDSPSMAEFARPPFPPNHDRRRSPSPAPAGTDCEVIRCTSNGSFHPSFERNLSMQRKSALLKTKTKSRLMDPPDEPVVDRRSGRVAKSGQLFSGFIGKKGDEEEDDPFMEEDFPDEYKKTQFSLWILLEWLSLILIIGALVTTLSVPLLREKNLWQLLLWKWEVMILVLICGRLVSDWFIRIAVFCIERNFLLRKRVLYFVYGVKKAVQNCVWLGLVLIAWHFLFDERVQRETKSDFLQYVTKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLAEEVQKLQNAGVTIPADLRDSAFRTNSGRSKSGMLPKSPVVKSARFSRPLSKKSDDGIGNGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSTADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTITNIGCII 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03081 603 Coils Coil 426 452 - -
Trre16g03081 603 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 71 597 IPR016688 -
Trre16g03081 603 MobiDBLite consensus disorder prediction 111 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03081 Trre-Chr16 26758881 26761417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03081 4 597 Mechanosensitive Ion Channel Family AT1G78610 52.291 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03081 K22048 - gmx:102665658 863.603