Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03070 ATGTCTTCACTCTTCCAAGACACCGACATAAAAGATTGGTTCAGTTCTGCTGACACCACAACACTCACCGTAACATTCTTAATAATTACCACTGTAACTTGGTATTTTTATCTCTTCTTCATCAAATCCAAAGCCCGGAACCTTCCACCAGGCCCACCGGGCCTTCCTTTCTTCGGTAACCTTCTATCTCTCGACCCAGAACTTCATACTTACTTCGCCGACCTGGCCCAAACCCACGGCCCAATTTTCAAACTCTGGCTCGGTAGTAAACTCGGAATCGTGTTAACCTCACCTTCCACGGCGCGTGAAGTTCTAAAAGACCACGATACCGTTTTCGCCAACCGTGACGTTCCCGCCGCAGGTAGAGCCGCCACATACGGCGGCACAGATATAGTATGGAGCCCGTATGGACCAGAATGGAGGATGCTGAGAAAAGTCTGTGTTCTCAAGATGCTTAGCAACACGACTCTTGACTCCGTTTACGAGCTCCGGCGAAGTGAAGTTCGGAAAACGATCGGGTCTATTCATGATCGGGTCGGGTCAACGGTGAAAATTGGGGAAGAAGTTTTTCTGACGGTGTTGAATGTGATTACGAACATGATGTGGGGTGCGGCGGTGGAAGGGGAAGAGAGGGTAAGTTTAGGGGCGGAGTTCAGGGAGACGGTGGCGGGAATTGTACATCTTTTAGGGAAACCGAATTTGTCGGATTTTTTTCCCGGGTTGGCCCGATTCGATTTGCAAGGTGTGGTGAAAGAGATGGATGTATTGGTTCCACGTTTTGATAGCATATTTGAAAAAATGATTGGTGAACGTAAGAAGAAGGAAGTGGAGGGGAATGAAAATGAAAGTAAGGATTTTCTGCAGTTTTTGTTGAATTTGAAGGATGAGGGTGATTCTAAGACTCCATTCACAATTACCCATGTTAAGGCTCTACTCATGGACATGGTTGTGGGTGGATCAGACACATCCTCCAACACAATTGAGTTTGCATTGGCAGAAATGATGAACAACCCAGAAGTAATGAGGAAGGTTCAAGAGGAATTAGAAGATGTAGTTGGGAAAGATAACTTAGTAGAAGAGTCTCACATTCATAAGCTACCCTACTTGCATGCAGTGATGAAAGAAACACTTCGTTTACACCCAGCACTTCCACTTTTAGTCCCTCACTGTCCAAGTGAAACCACCAATGTTGGAGGCTACACAATTCCAAAGGGATCTCGTGTGTTTGTGAACGTTTGGGCTATTCATAGAGACCCTTCCATTTGGGAGAAACCACTAGAATTTGATCCTACAAGGTTCTTGGATGGTAAATGGGATTACAGTGGAAATGACTTCAATTATTTTCCATTTGGTTCTGGGAGAAGGATTTGTGCTGGAATAGCAATGGCTGAGAGGACTGTTTTGTACTTCATAGCTACCCTTGTCCACTTGTTTGACTGGACTATACCACAAGGAGAAAACTTGGAGGTATCAGAGAAATTTGGTATTGTTCTAAAAAAGAAGACACCTCTACTTGCCATACCCACGCCGCGACTTTCCAATCCAGAGCTTTATAAATAG 1560 0.45 MSSLFQDTDIKDWFSSADTTTLTVTFLIITTVTWYFYLFFIKSKARNLPPGPPGLPFFGNLLSLDPELHTYFADLAQTHGPIFKLWLGSKLGIVLTSPSTAREVLKDHDTVFANRDVPAAGRAATYGGTDIVWSPYGPEWRMLRKVCVLKMLSNTTLDSVYELRRSEVRKTIGSIHDRVGSTVKIGEEVFLTVLNVITNMMWGAAVEGEERVSLGAEFRETVAGIVHLLGKPNLSDFFPGLARFDLQGVVKEMDVLVPRFDSIFEKMIGERKKKEVEGNENESKDFLQFLLNLKDEGDSKTPFTITHVKALLMDMVVGGSDTSSNTIEFALAEMMNNPEVMRKVQEELEDVVGKDNLVEESHIHKLPYLHAVMKETLRLHPALPLLVPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWEKPLEFDPTRFLDGKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFIATLVHLFDWTIPQGENLEVSEKFGIVLKKKTPLLAIPTPRLSNPELYK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03070 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 Gene3D Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 Pfam Cytochrome P450 49 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PANTHER OS08G0547900 PROTEIN 19 519 - -
Trre16g03070 519 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g03070 519 CDD CYP76-like 76 508 - -
Trre16g03070 519 FunFam Cytochrome P450 - like protein 38 505 - -
Trre16g03070 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre16g03070 519 SUPERFAMILY Cytochrome P450 49 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03070 Trre-Chr16 26520947 26523565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03070 10 518 Cytochrome P450 AT4G12300 59.844 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g03070 - - gmx:100783085 793.497