Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g03064 ATGGGTTATTTCATTTTCATTGCTCTCACTTTCGTGTCGAGCTTCTATATTCATTTTACTCGAGGAAGTGAATTGCGTCCTACTACCGAAACAAGCAGTTCAAAAATATACATTATTCATGTAAATGAGCCGGAGGGTAAGATGTTTACTCAATCAGATTCAGAACAAGATTTAGAAAGTTGGCACCATTCATTCATGCCAGCTACTGTTATGAGCAGCTCTAACGAACAACCGCGAATGATTTATTCATACCGAAATGTGTTGAGTGGTTTTGCTGCAAGACTCACTCAAGATGAGCTTAGAGCTGTGGAACAAAAAAATGGCTTCATTTCAGCTCATCCTGAAAGGTCACTACGTCGTCAAACCACACATACACCAAGTTTCTTGGGGTTGCAGCAAAATATAGGATTATGGAAGGATTCGAATTTTGGAAAAGGAGTTATTATTGGTGTTCTCGATTCAGGAATCACACCTGATCATCCTTCATTCAATGATGCAGGAATAGCACCACCACCATCCAAATGGAAAGGACGATGCGAACTTAATGGTACAACGTGTAACAACAAACTAATTGGAGCAAGATCCTTCAACAACGCAGTTACTAAAGCTGAGGCACCAATTGATGAGGACGGACACGGGACTCACACAGCAAGTACGGCGGCTGGTGCTTTTGTCGACAATGCAGATGTGTTAGGAAATGCTAAAGGTACAGCAGCAGGGATTGCCCCTCATGCTCACCTAGCAATTTACAAAGTGTGTTTTGGTGAAGACTGTCCCGAGAGTGATATACTTGCAGCATTAGATGCAGCTGTGGAGGATGGTGTCGATGTAATATCGATATCGCTCGGTCTAACTGAACCACCTCCATTTTTCAATGATAGCACTGCCATAGGTGCATTTGCAGCAACCCAAAAGGGAATCTTTGTAAGTTGTGCAGGAGGAAACTCTGGACCTTCTGAAGGATCCTTGGTTAATGGAGCCCCATGGATCCTCACAGTCGGAGCTAGCACTATCGACAGAAGCATTGTAGCAACAGCAGTGATAGGAAATGGGGAAGAATTTGATGGTGAATCAGTTTTCCAGCCTTCCGATTTCCATCCAACCTTGTTGCCCTTAGCATATGCAGGAGTGAATGGCAAACCAGAATCTGTATTTTGTGCTAATGGATCCTTGAATGACATTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGGGGAGGAGGTATAGGAAGAATTGCCAAAGGACAGGAAGTAAAAAGAGCAGGTGGTGCCGCAATGATTCTCACGAATGACGAAATCAATGGCTTCAGTCTCTCAGCTGATGTACATGTCCTACCAGCAACACATGTAAGCTATGCTGCTGGACAAAAGATCAAGGACTATATAAATTCAACTTCAACACCTACAGCAACCGTTTCATTTAAGGGAACGATTATCGGAAACTCACAATCCCCAGCCGTTGCGTCCTTCTCTTCAAGAGGTCCCAATTTGCCGAGTCCTGGGATACTAAAACCAGATATTATAGGACCGGGTGTGAACATCCTAGCTGCCTGGCCATTCCCCCTGAATAACAGCACCAATTCAAAACTCAATTTCAACATCGAGTCAGGCACATCAATGTCATGCCCACATCTTAGCGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTGATTGGTCGCCCGCAGCCATAAAATCTGCCATAATGACTTCCGCAGACACACTAAATTTAGAAAACAAACTCATTGTTGATGAAACACTTCAGCCGGCAAATATCTTTGCCACAGGTTCGGGCCACGTGAATCCATCTAGAGCAGATGATCCCGGGTTAGTATATGATATCCAACCTGATGATTATATACCTTATCTATGTGGTTTAGGCTACAGTGACAGGGAAGTTGGGATCATTGCACACAAGAAAATTAACTGCACTGAGACGTCAAGCATTCCTGAAGGAGAGCTTAACTATCCCTCATTTTCTGTCGTGCTTGGCTCCTCACAGACATTCACACGGACAGTGACAAATGTCGGTGAGGCCTACTCATCTTATGTTGCCATAGTTATGGAACCAAAAGGAGTTGATGTGAAAGTCCAACCAAAAAAGCTTTACTTTTCAGAAGCCAACCAAAAACAGACATATTCAGTGACATTCAACCGTATAGGGTCGGGTAACAAGACAACAGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTGCTAAACACACTGTCACGAGCCCTGTCTCGGCCAAATTTGCATAA 2259 0.4365 MGYFIFIALTFVSSFYIHFTRGSELRPTTETSSSKIYIIHVNEPEGKMFTQSDSEQDLESWHHSFMPATVMSSSNEQPRMIYSYRNVLSGFAARLTQDELRAVEQKNGFISAHPERSLRRQTTHTPSFLGLQQNIGLWKDSNFGKGVIIGVLDSGITPDHPSFNDAGIAPPPSKWKGRCELNGTTCNNKLIGARSFNNAVTKAEAPIDEDGHGTHTASTAAGAFVDNADVLGNAKGTAAGIAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLTEPPPFFNDSTAIGAFAATQKGIFVSCAGGNSGPSEGSLVNGAPWILTVGASTIDRSIVATAVIGNGEEFDGESVFQPSDFHPTLLPLAYAGVNGKPESVFCANGSLNDIDFRGKVVLCERGGGIGRIAKGQEVKRAGGAAMILTNDEINGFSLSADVHVLPATHVSYAAGQKIKDYINSTSTPTATVSFKGTIIGNSQSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTNSKLNFNIESGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTSADTLNLENKLIVDETLQPANIFATGSGHVNPSRADDPGLVYDIQPDDYIPYLCGLGYSDREVGIIAHKKINCTETSSIPEGELNYPSFSVVLGSSQTFTRTVTNVGEAYSSYVAIVMEPKGVDVKVQPKKLYFSEANQKQTYSVTFNRIGSGNKTTEYAQGFLKWVSAKHTVTSPVSAKFA 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g03064 752 CDD Peptidases_S8_3 121 573 IPR034197 -
Trre16g03064 752 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Trre16g03064 752 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Trre16g03064 752 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Trre16g03064 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 120 IPR037045 -
Trre16g03064 752 Gene3D - 623 751 - -
Trre16g03064 752 ProSiteProfiles Serine proteases, subtilase domain profile. 128 606 - -
Trre16g03064 752 Pfam Subtilase family 144 575 IPR000209 GO:0006508|GO:0008236
Trre16g03064 752 Pfam Peptidase inhibitor I9 37 119 IPR010259 -
Trre16g03064 752 Gene3D Peptidase S8/S53 domain 146 619 IPR036852 GO:0004252|GO:0006508
Trre16g03064 752 FunFam subtilisin-like protease SBT1.5 339 479 - -
Trre16g03064 752 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Trre16g03064 752 FunFam Subtilisin-like protease SBT1.5 146 378 - -
Trre16g03064 752 SUPERFAMILY Subtilisin-like 121 610 IPR036852 GO:0004252|GO:0006508
Trre16g03064 752 Gene3D - 339 480 - -
Trre16g03064 752 Pfam Fibronectin type-III domain 653 747 IPR041469 -
Trre16g03064 752 SUPERFAMILY PA domain 368 466 IPR046450 -
Trre16g03064 752 CDD PA_subtilisin_like 345 472 - -
Trre16g03064 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 748 IPR045051 -
Trre16g03064 752 Pfam PA domain 385 458 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g03064 Trre-Chr16 26392659 26394917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g03064 28 751 Subtilisin-like Serine Gene Family AT1G04110 44.299 0.0 602